Pseudomonas sp. NFACC16-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. NFACC16-2 is characterized by having a single replicon, indicating a streamlined genomic structure typical of many Pseudomonas species. This trait can contribute to effective metabolic processes and adaptability in various environments. The strain is cataloged in the genomic database under the accession number FPIX00000000.1, which provides a reference for genomic studies and comparisons with other strains. Pseudomonas species are known for their diverse metabolic capabilities, which allow them to thrive in a wide range of ecological niches. While specific metabolic traits for NFACC16-2 are not provided, the genus Pseudomonas is generally recognized for its ability to degrade organic pollutants and its role in nutrient cycling. This adaptability suggests that Pseudomonas sp. NFACC16-2 may play a significant role in bioremediation processes or in maintaining soil health, particularly in environments contaminated with organic compounds. Overall, the single replicon structure of Pseudomonas sp. NFACC16-2, combined with the species' ecological versatility, highlights its potential importance in environmental microbiology. Further investigation into its specific metabolic pathways could provide insights into its applications in bioremediation and ecological sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. NFACC16-2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. NFACC16-2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. NFACC16-2 genome assembly, contig:

Gene Summary

Adenine Count

1309132 bp

Thymine Count

1301504 bp

Guanine Count

2003346 bp

Cytosine Count

2014975 bp

Genome Length

6637356 bp

Protein-coding Genes

5795 genes

Non-Coding Genes

169 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein of unknown functionSAMN05660640_05413Not AvailableNegative5935514 - 59357147644.62
uncharacterized membrane protein ycccSAMN05660640_05414Not AvailableNegative5935704 - 593792081629.7
efflux transporter, outer membrane factor (omf) lipoprotein, nodt familySAMN05660640_05415Not AvailableNegative5937932 - 593952456924.5
transcriptional regulator, lysr familySAMN05660640_05416Not AvailablePositive5939814 - 594078234986.9
hypothetical proteinSAMN05660640_05417Not AvailableNegative5940811 - 59410688751.18
rnd family efflux transporter, mfp subunitSAMN05660640_05418Not AvailablePositive5941303 - 594246041540.4
hydrophobe/amphiphile efflux-1 (hae1) family proteinSAMN05660640_05419Not AvailablePositive5942457 - 5945573110424.0
two component heavy metal response transcriptional regulator, winged helix familySAMN05660640_05420Not AvailablePositive5945583 - 594626625436.8
two-component system, ompr family, heavy metal sensor histidine kinase cussSAMN05660640_05421Not AvailablePositive5946253 - 594762050192.7
diguanylate cyclase (ggdef) domain-containing proteinSAMN05660640_05422Not AvailablePositive5947851 - 594934755012.0

Displaying genes 5301 – 5310 of 5964 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.