Pseudomonas sp. NFACC16-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. NFACC16-2 is characterized by having a single replicon, indicating a streamlined genomic structure typical of many Pseudomonas species. This trait can contribute to effective metabolic processes and adaptability in various environments. The strain is cataloged in the genomic database under the accession number FPIX00000000.1, which provides a reference for genomic studies and comparisons with other strains. Pseudomonas species are known for their diverse metabolic capabilities, which allow them to thrive in a wide range of ecological niches. While specific metabolic traits for NFACC16-2 are not provided, the genus Pseudomonas is generally recognized for its ability to degrade organic pollutants and its role in nutrient cycling. This adaptability suggests that Pseudomonas sp. NFACC16-2 may play a significant role in bioremediation processes or in maintaining soil health, particularly in environments contaminated with organic compounds. Overall, the single replicon structure of Pseudomonas sp. NFACC16-2, combined with the species' ecological versatility, highlights its potential importance in environmental microbiology. Further investigation into its specific metabolic pathways could provide insights into its applications in bioremediation and ecological sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. NFACC16-2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. NFACC16-2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. NFACC16-2 genome assembly, contig:

Gene Summary

Adenine Count

1309132 bp

Thymine Count

1301504 bp

Guanine Count

2003346 bp

Cytosine Count

2014975 bp

Genome Length

6637356 bp

Protein-coding Genes

5795 genes

Non-Coding Genes

169 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
homoprotocatechuate degradation operon regulator, hparSAMN05660640_04986Not AvailableNegative5501286 - 550170816198.7
arac family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory proteinSAMN05660640_04987Not AvailableNegative5501771 - 550267634473.2
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomeraseSAMN05660640_04988Not AvailablePositive5502863 - 550354024365.2
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomeraseSAMN05660640_04989Not AvailablePositive5503537 - 550430728562.8
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseSAMN05660640_04990Not AvailablePositive5504313 - 550577352776.4
3,4-dihydroxyphenylacetate 2,3-dioxygenaseSAMN05660640_04991Not AvailablePositive5505993 - 550685031805.8
5-carboxymethyl-2-hydroxymuconate isomeraseSAMN05660640_04992Not AvailablePositive5506941 - 550733314713.7
sugar phosphate permeaseSAMN05660640_04993Not AvailablePositive5507386 - 550869046885.2
2-oxo-hept-3-ene-1,7-dioate hydrataseSAMN05660640_04994Not AvailablePositive5508703 - 550950629391.2
4-hydroxy-2-oxoheptanedioate aldolaseSAMN05660640_04995Not AvailablePositive5509520 - 551031728100.9

Displaying genes 4931 – 4940 of 5964 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.