Pseudomonas sp. NFACC16-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. NFACC16-2 is characterized by having a single replicon, indicating a streamlined genomic structure typical of many Pseudomonas species. This trait can contribute to effective metabolic processes and adaptability in various environments. The strain is cataloged in the genomic database under the accession number FPIX00000000.1, which provides a reference for genomic studies and comparisons with other strains. Pseudomonas species are known for their diverse metabolic capabilities, which allow them to thrive in a wide range of ecological niches. While specific metabolic traits for NFACC16-2 are not provided, the genus Pseudomonas is generally recognized for its ability to degrade organic pollutants and its role in nutrient cycling. This adaptability suggests that Pseudomonas sp. NFACC16-2 may play a significant role in bioremediation processes or in maintaining soil health, particularly in environments contaminated with organic compounds. Overall, the single replicon structure of Pseudomonas sp. NFACC16-2, combined with the species' ecological versatility, highlights its potential importance in environmental microbiology. Further investigation into its specific metabolic pathways could provide insights into its applications in bioremediation and ecological sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. NFACC16-2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. NFACC16-2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. NFACC16-2 genome assembly, contig:

Gene Summary

Adenine Count

1309132 bp

Thymine Count

1301504 bp

Guanine Count

2003346 bp

Cytosine Count

2014975 bp

Genome Length

6637356 bp

Protein-coding Genes

5795 genes

Non-Coding Genes

169 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nitt/taut family transport system substrate-binding proteinSAMN05660640_04956Not AvailableNegative5468044 - 546904536120.7
nitt/taut family transport system atp-binding proteinSAMN05660640_04957Not AvailableNegative5469042 - 546988130969.4
gntr family transcriptional regulatorSAMN05660640_04958Not AvailablePositive5470016 - 547075026977.3
dna-binding transcriptional regulator, marr familySAMN05660640_04959Not AvailableNegative5470757 - 547164732553.8
transcriptional regulator, tetr familySAMN05660640_04960Not AvailableNegative5471895 - 547249121987.4
nad dependent epimerase/dehydratase family proteinSAMN05660640_04961Not AvailablePositive5473002 - 547401537712.3
long-chain acyl-coa synthetaseSAMN05660640_04962Not AvailablePositive5474097 - 547561755463.2
had-superfamily subfamily ib hydrolase, tigr01490SAMN05660640_04963Not AvailablePositive5475607 - 547621823062.9
2-polyprenyl-6-methoxyphenol hydroxylaseSAMN05660640_04964Not AvailablePositive5476222 - 547798565790.0
phosphopantetheine attachment siteSAMN05660640_04965Not AvailablePositive5478104 - 547919539184.3

Displaying genes 4901 – 4910 of 5964 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.