Pseudomonas sp. NFACC16-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. NFACC16-2 is characterized by having a single replicon, indicating a streamlined genomic structure typical of many Pseudomonas species. This trait can contribute to effective metabolic processes and adaptability in various environments. The strain is cataloged in the genomic database under the accession number FPIX00000000.1, which provides a reference for genomic studies and comparisons with other strains. Pseudomonas species are known for their diverse metabolic capabilities, which allow them to thrive in a wide range of ecological niches. While specific metabolic traits for NFACC16-2 are not provided, the genus Pseudomonas is generally recognized for its ability to degrade organic pollutants and its role in nutrient cycling. This adaptability suggests that Pseudomonas sp. NFACC16-2 may play a significant role in bioremediation processes or in maintaining soil health, particularly in environments contaminated with organic compounds. Overall, the single replicon structure of Pseudomonas sp. NFACC16-2, combined with the species' ecological versatility, highlights its potential importance in environmental microbiology. Further investigation into its specific metabolic pathways could provide insights into its applications in bioremediation and ecological sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. NFACC16-2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. NFACC16-2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. NFACC16-2 genome assembly, contig:

Gene Summary

Adenine Count

1309132 bp

Thymine Count

1301504 bp

Guanine Count

2003346 bp

Cytosine Count

2014975 bp

Genome Length

6637356 bp

Protein-coding Genes

5795 genes

Non-Coding Genes

169 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
molybdenum cofactor cytidylyltransferaseSAMN05660640_04519Not AvailableNegative4966548 - 496713820402.6
xanthine dehydrogenase accessory factorSAMN05660640_04520Not AvailableNegative4967159 - 496813035295.7
isoquinoline 1-oxidoreductase, beta subunitSAMN05660640_04521Not AvailableNegative4968130 - 497044583355.8
isoquinoline 1-oxidoreductase, alpha subunitSAMN05660640_04522Not AvailableNegative4970442 - 497091216616.0
udp-n-acetylmuramate dehydrogenaseSAMN05660640_04523Not AvailableNegative4971180 - 497219937073.5
protein-tyrosine phosphataseSAMN05660640_04524Not AvailableNegative4972196 - 497266017081.4
3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase)SAMN05660640_04525Not AvailableNegative4972660 - 497342427590.1
hypothetical proteinSAMN05660640_04526Not AvailableNegative4973421 - 49736066616.16
lipid-a-disaccharide kinaseSAMN05660640_04527Not AvailableNegative4973630 - 497464037172.0
biopolymer transport protein exbdSAMN05660640_04528Not AvailableNegative4974640 - 497506815362.5

Displaying genes 4471 – 4480 of 5964 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.