Pseudomonas sp. NFACC16-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. NFACC16-2 is characterized by having a single replicon, indicating a streamlined genomic structure typical of many Pseudomonas species. This trait can contribute to effective metabolic processes and adaptability in various environments. The strain is cataloged in the genomic database under the accession number FPIX00000000.1, which provides a reference for genomic studies and comparisons with other strains. Pseudomonas species are known for their diverse metabolic capabilities, which allow them to thrive in a wide range of ecological niches. While specific metabolic traits for NFACC16-2 are not provided, the genus Pseudomonas is generally recognized for its ability to degrade organic pollutants and its role in nutrient cycling. This adaptability suggests that Pseudomonas sp. NFACC16-2 may play a significant role in bioremediation processes or in maintaining soil health, particularly in environments contaminated with organic compounds. Overall, the single replicon structure of Pseudomonas sp. NFACC16-2, combined with the species' ecological versatility, highlights its potential importance in environmental microbiology. Further investigation into its specific metabolic pathways could provide insights into its applications in bioremediation and ecological sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. NFACC16-2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. NFACC16-2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. NFACC16-2 genome assembly, contig:

Gene Summary

Adenine Count

1309132 bp

Thymine Count

1301504 bp

Guanine Count

2003346 bp

Cytosine Count

2014975 bp

Genome Length

6637356 bp

Protein-coding Genes

5795 genes

Non-Coding Genes

169 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-binding transcriptional regulator, lysr familySAMN05660640_01956Not AvailableNegative2231858 - 223274533049.0
lysm domain-containing proteinSAMN05660640_01957Not AvailablePositive2232879 - 223331915462.5
putative hydrolase of the had superfamilySAMN05660640_01958Not AvailableNegative2233425 - 223408725269.1
adp-ribose diphosphataseSAMN05660640_01959Not AvailablePositive2234176 - 223474220849.0
3'(2'), 5'-bisphosphate nucleotidaseSAMN05660640_01960Not AvailablePositive2234739 - 223556629171.8
thioesterase domain-containing protein, putativeSAMN05660640_01961Not AvailableNegative2235698 - 223615317172.7
two-component system, ntrc family, c4-dicarboxylate transport response regulator dctdSAMN05660640_01962Not AvailableNegative2236191 - 223758250596.8
histidine kinaseSAMN05660640_01963Not AvailableNegative2237579 - 223938766716.5
dtdp-4-dehydrorhamnose reductaseSAMN05660640_01964Not AvailableNegative2239459 - 224034031749.6
dtdp-4-dehydrorhamnose 3,5-epimeraseSAMN05660640_01965Not AvailableNegative2240337 - 224088220423.1

Displaying genes 2061 – 2070 of 5964 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.