Corticibacter populi str. DSM 105136

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Corticibacter

Description

Corticibacter populi str. DSM 105136 is a bacterial strain characterized by a single replicon. It has been assigned the accession number RDQO00000000.1, which provides a unique identifier in genomic databases. This strain belongs to the genus Corticibacter, which is notable for its ecological role in various environments. The presence of only one replicon suggests a streamlined genetic organization, which could be indicative of specific adaptations to its ecological niche. While detailed functional traits of Corticibacter populi str. DSM 105136 are not provided, members of the Corticibacter genus are often associated with plant environments, particularly in association with wood and other plant materials. Understanding the genomic characteristics and ecological roles of Corticibacter populi str. DSM 105136 can provide insights into microbial diversity and interactions within ecosystems. The unique traits of this strain may contribute to its ability to thrive in particular ecological niches, potentially influencing nutrient cycling and plant health. The study of such specific microbial strains is crucial for a more comprehensive understanding of microbial ecology and the roles they play in their environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusCorticibacter
SpeciesCorticibacter populi
StrainDSM 105136

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Corticibacter populi str. DSM 105136
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Corticibacter populi strain DSM 105136 DSM105136T_13, whole genome

Gene Summary

Adenine Count

733638 bp

Thymine Count

720447 bp

Guanine Count

1358940 bp

Cytosine Count

1388144 bp

Genome Length

4201169 bp

Protein-coding Genes

3590 genes

Non-Coding Genes

114 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tripartite tricarboxylate transporter substrate binding proteinD8I35_04410Not AvailableNegative984608 - 98559434090.0
lysr family transcriptional regulatorD8I35_04415Not AvailableNegative985766 - 98670133583.1
phosphoribosyl-atp diphosphataseD8I35_04420Not AvailableNegative986812 - 98719513759.3
phosphoribosyl-amp cyclohydrolaseD8I35_04425Not AvailableNegative987203 - 98762215732.4
imidazole glycerol phosphate synthase subunit hisfD8I35_04430Not AvailableNegative987674 - 98847427982.4
d-hexose-6-phosphate mutarotaseD8I35_04435Not AvailableNegative988511 - 98934730069.9
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseD8I35_04440Not AvailableNegative989362 - 99010826667.9
imidazole glycerol phosphate synthase subunit hishD8I35_04445Not AvailableNegative990171 - 99083324479.9
imidazoleglycerol-phosphate dehydratase hisbD8I35_04450Not AvailableNegative990953 - 99158522839.2
hypothetical proteinD8I35_04455Not AvailablePositive992000 - 99380863248.1

Displaying genes 961 – 970 of 3704 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.