Corticibacter populi str. DSM 105136

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Corticibacter

Description

Corticibacter populi str. DSM 105136 is a bacterial strain characterized by a single replicon. It has been assigned the accession number RDQO00000000.1, which provides a unique identifier in genomic databases. This strain belongs to the genus Corticibacter, which is notable for its ecological role in various environments. The presence of only one replicon suggests a streamlined genetic organization, which could be indicative of specific adaptations to its ecological niche. While detailed functional traits of Corticibacter populi str. DSM 105136 are not provided, members of the Corticibacter genus are often associated with plant environments, particularly in association with wood and other plant materials. Understanding the genomic characteristics and ecological roles of Corticibacter populi str. DSM 105136 can provide insights into microbial diversity and interactions within ecosystems. The unique traits of this strain may contribute to its ability to thrive in particular ecological niches, potentially influencing nutrient cycling and plant health. The study of such specific microbial strains is crucial for a more comprehensive understanding of microbial ecology and the roles they play in their environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusCorticibacter
SpeciesCorticibacter populi
StrainDSM 105136

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Corticibacter populi str. DSM 105136
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Corticibacter populi strain DSM 105136 DSM105136T_13, whole genome

Gene Summary

Adenine Count

733638 bp

Thymine Count

720447 bp

Guanine Count

1358940 bp

Cytosine Count

1388144 bp

Genome Length

4201169 bp

Protein-coding Genes

3590 genes

Non-Coding Genes

114 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fe2+-enterobactin abc transporter substrate-binding proteinD8I35_03855Not AvailablePositive856233 - 85722835122.7
iron abc transporter permeaseD8I35_03860Not AvailablePositive857200 - 85823435092.7
fe(3+)-siderophore abc transporter permeaseD8I35_03865Not AvailablePositive858252 - 85929835622.1
abc transporter atp-binding proteinD8I35_03870Not AvailablePositive859310 - 86015530436.2
type ii toxin-antitoxin system hipa family toxinD8I35_03875Not AvailableNegative860612 - 86191948535.1
xre family transcriptional regulatorD8I35_03880Not AvailableNegative861916 - 86227813305.9
dihydrolipoyl dehydrogenaseD8I35_03885Not AvailableNegative862529 - 86432862545.4
dihydrolipoyllysine-residue acetyltransferaseD8I35_03890Not AvailableNegative864347 - 86602957383.9
pyruvate dehydrogenase (acetyl-transferring), homodimeric typeD8I35_03895Not AvailableNegative866052 - 868778101542.0
pas domain-containing sensor histidine kinaseD8I35_03900Not AvailablePositive869024 - 87153793618.6

Displaying genes 851 – 860 of 3704 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.