Corticibacter populi str. DSM 105136

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Corticibacter

Description

Corticibacter populi str. DSM 105136 is a bacterial strain characterized by a single replicon. It has been assigned the accession number RDQO00000000.1, which provides a unique identifier in genomic databases. This strain belongs to the genus Corticibacter, which is notable for its ecological role in various environments. The presence of only one replicon suggests a streamlined genetic organization, which could be indicative of specific adaptations to its ecological niche. While detailed functional traits of Corticibacter populi str. DSM 105136 are not provided, members of the Corticibacter genus are often associated with plant environments, particularly in association with wood and other plant materials. Understanding the genomic characteristics and ecological roles of Corticibacter populi str. DSM 105136 can provide insights into microbial diversity and interactions within ecosystems. The unique traits of this strain may contribute to its ability to thrive in particular ecological niches, potentially influencing nutrient cycling and plant health. The study of such specific microbial strains is crucial for a more comprehensive understanding of microbial ecology and the roles they play in their environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusCorticibacter
SpeciesCorticibacter populi
StrainDSM 105136

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Corticibacter populi str. DSM 105136
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Corticibacter populi strain DSM 105136 DSM105136T_13, whole genome

Gene Summary

Adenine Count

733638 bp

Thymine Count

720447 bp

Guanine Count

1358940 bp

Cytosine Count

1388144 bp

Genome Length

4201169 bp

Protein-coding Genes

3590 genes

Non-Coding Genes

114 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tigr02281 family clan aa aspartic proteaseD8I35_18460Not AvailableNegative4125859 - 412655123795.1
yajq family cyclic di-gmp-binding proteinD8I35_18465Not AvailableNegative4126577 - 412706217920.4
udp-n-acetylmuramate dehydrogenaseD8I35_18470Not AvailablePositive4127219 - 412834941075.8
arac family transcriptional regulatorD8I35_18475Not AvailablePositive4128424 - 412888816722.6
arsc family reductaseD8I35_18480Not AvailablePositive4128949 - 412934414558.4
nad(p)/fad-dependent oxidoreductaseD8I35_18485Not AvailableNegative4129357 - 413071848904.9
30s ribosomal protein s12 methylthiotransferase rimoD8I35_18490Not AvailablePositive4131042 - 413244250494.8
marr family transcriptional regulatorD8I35_18495Not AvailablePositive4132801 - 413333719651.7
efflux transporter outer membrane subunitD8I35_18500Not AvailablePositive4133345 - 413497056725.0
hlyd family efflux transporter periplasmic adaptor subunitD8I35_18505Not AvailablePositive4134967 - 413623544805.3

Displaying genes 3641 – 3650 of 3704 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.