Pararheinheimera mesophila str. IITR13

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Chromatiaceae

Genus

Rheinheimera

Description

Pararheinheimera mesophila str. IITR13 is a Gram-negative, rod-shaped bacterium characterized by its single replicon structure. This classification places it within a specific group of bacteria that are typically associated with diverse environments and ecological roles. The designation of being Gram-negative indicates that it possesses a thin peptidoglycan layer surrounded by an outer membrane, which is a trait commonly associated with bacteria that can exhibit resistance to certain antibiotics and can be involved in various biological processes. The strain IITR13 is cataloged under the accession number RRCF00000000.1, which serves as a reference for genomic data associated with this particular strain. The single replicon structure suggests a streamlined genomic organization that is often observed in bacteria optimized for specific ecological niches. From an ecological perspective, the characteristics of Pararheinheimera mesophila str. IITR13 may allow it to thrive in environments where nutrient availability fluctuates, potentially contributing to biogeochemical cycles. Its Gram-negative nature and rod shape may also influence its interactions with other microorganisms and its adaptability to various environmental stresses. Understanding the traits of this bacterium can shed light on its ecological roles and potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyChromatiaceae
GenusRheinheimera
SpeciesRheinheimera mesophila
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pararheinheimera mesophila str. IITR13
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rheinheimera mesophila strain IITR13 contig22, whole genome

Gene Summary

Adenine Count

1003444 bp

Thymine Count

986202 bp

Guanine Count

899884 bp

Cytosine Count

927878 bp

Genome Length

3818952 bp

Protein-coding Genes

3390 genes

Non-Coding Genes

144 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf72 domain-containing proteinEIK76_14480Not AvailableNegative3135882 - 313672132183.6
diguanylate cyclaseEIK76_14485Not AvailablePositive3136803 - 3139622106942.0
aspartate--trna ligaseEIK76_14490Not AvailablePositive3139763 - 314153865869.2
yebc/pmpr family dna-binding transcriptional regulatorEIK76_14495Not AvailablePositive3141636 - 314237626881.8
crossover junction endodeoxyribonuclease ruvcEIK76_14500Not AvailablePositive3142376 - 314289718603.6
holliday junction branch migration protein ruvaEIK76_14505Not AvailablePositive3142925 - 314354822772.9
holliday junction branch migration dna helicase ruvbEIK76_14510Not AvailablePositive3143561 - 314457137027.8
tol-pal system-associated acyl-coa thioesteraseEIK76_14515Not AvailablePositive3145283 - 314570816214.8
protein tolqEIK76_14520Not AvailablePositive3145683 - 314636624612.3
protein tolrEIK76_14525Not AvailablePositive3146366 - 314679715754.4

Displaying genes 2891 – 2900 of 3542 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.