Pararheinheimera mesophila str. IITR13

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Chromatiaceae

Genus

Rheinheimera

Description

Pararheinheimera mesophila str. IITR13 is a Gram-negative, rod-shaped bacterium characterized by its single replicon structure. This classification places it within a specific group of bacteria that are typically associated with diverse environments and ecological roles. The designation of being Gram-negative indicates that it possesses a thin peptidoglycan layer surrounded by an outer membrane, which is a trait commonly associated with bacteria that can exhibit resistance to certain antibiotics and can be involved in various biological processes. The strain IITR13 is cataloged under the accession number RRCF00000000.1, which serves as a reference for genomic data associated with this particular strain. The single replicon structure suggests a streamlined genomic organization that is often observed in bacteria optimized for specific ecological niches. From an ecological perspective, the characteristics of Pararheinheimera mesophila str. IITR13 may allow it to thrive in environments where nutrient availability fluctuates, potentially contributing to biogeochemical cycles. Its Gram-negative nature and rod shape may also influence its interactions with other microorganisms and its adaptability to various environmental stresses. Understanding the traits of this bacterium can shed light on its ecological roles and potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyChromatiaceae
GenusRheinheimera
SpeciesRheinheimera mesophila
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pararheinheimera mesophila str. IITR13
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rheinheimera mesophila strain IITR13 contig22, whole genome

Gene Summary

Adenine Count

1003444 bp

Thymine Count

986202 bp

Guanine Count

899884 bp

Cytosine Count

927878 bp

Genome Length

3818952 bp

Protein-coding Genes

3390 genes

Non-Coding Genes

144 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-protecting protein dpraEIK76_12955Not AvailablePositive2820731 - 282182239377.2
duf494 domain-containing proteinEIK76_12960Not AvailablePositive2821825 - 282229818325.8
hypothetical proteinEIK76_12965Not AvailablePositive2822382 - 282292720144.2
5-(carboxyamino)imidazole ribonucleotide synthaseEIK76_12970Not AvailableNegative2822964 - 282411541718.1
5-(carboxyamino)imidazole ribonucleotide mutaseEIK76_12975Not AvailableNegative2824119 - 282460416555.1
trna threonylcarbamoyladenosine biosynthesis protein rimnEIK76_12980Not AvailablePositive2824750 - 282533420825.0
oxygen-dependent coproporphyrinogen oxidaseEIK76_12985Not AvailablePositive2825361 - 282628134807.1
hemoglobin-like oxygen-binding proteinEIK76_12990Not AvailableNegative2826298 - 282671716027.4
shikimate dehydrogenaseEIK76_12995Not AvailablePositive2826748 - 282756328801.7
duf1488 domain-containing proteinEIK76_13000Not AvailablePositive2827560 - 28278089654.11

Displaying genes 2591 – 2600 of 3542 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.