Pararheinheimera mesophila str. IITR13

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Chromatiaceae

Genus

Rheinheimera

Description

Pararheinheimera mesophila str. IITR13 is a Gram-negative, rod-shaped bacterium characterized by its single replicon structure. This classification places it within a specific group of bacteria that are typically associated with diverse environments and ecological roles. The designation of being Gram-negative indicates that it possesses a thin peptidoglycan layer surrounded by an outer membrane, which is a trait commonly associated with bacteria that can exhibit resistance to certain antibiotics and can be involved in various biological processes. The strain IITR13 is cataloged under the accession number RRCF00000000.1, which serves as a reference for genomic data associated with this particular strain. The single replicon structure suggests a streamlined genomic organization that is often observed in bacteria optimized for specific ecological niches. From an ecological perspective, the characteristics of Pararheinheimera mesophila str. IITR13 may allow it to thrive in environments where nutrient availability fluctuates, potentially contributing to biogeochemical cycles. Its Gram-negative nature and rod shape may also influence its interactions with other microorganisms and its adaptability to various environmental stresses. Understanding the traits of this bacterium can shed light on its ecological roles and potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyChromatiaceae
GenusRheinheimera
SpeciesRheinheimera mesophila
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pararheinheimera mesophila str. IITR13
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rheinheimera mesophila strain IITR13 contig22, whole genome

Gene Summary

Adenine Count

1003444 bp

Thymine Count

986202 bp

Guanine Count

899884 bp

Cytosine Count

927878 bp

Genome Length

3818952 bp

Protein-coding Genes

3390 genes

Non-Coding Genes

144 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cell division protein zapeEIK76_07785Not AvailableNegative1661586 - 166268042198.8
duf1043 family proteinEIK76_07790Not AvailablePositive1662805 - 166325717481.7
do family serine endopeptidaseEIK76_07795Not AvailablePositive1663335 - 166469647242.2
outer membrane-stress sensor serine endopeptidase degsEIK76_07800Not AvailablePositive1664795 - 166587438291.2
udp-n-acetylglucosamine 1-carboxyvinyltransferaseEIK76_07805Not AvailableNegative1665943 - 166720544731.6
bola family transcriptional regulatorEIK76_07810Not AvailableNegative1667215 - 16674729520.53
stas domain-containing proteinEIK76_07815Not AvailableNegative1667462 - 166777611549.2
abc transporter substrate-binding proteinEIK76_07820Not AvailableNegative1667760 - 166842524717.9
outer membrane lipid asymmetry maintenance protein mladEIK76_07825Not AvailableNegative1668428 - 166889516688.2
lipid asymmetry maintenance abc transporter permease subunit mlaeEIK76_07830Not AvailableNegative1668899 - 166968127555.7

Displaying genes 1561 – 1570 of 3542 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.