Bombella intestini str. R-52487

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Acetobacterales

Family

Acetobacteraceae

Genus

Bombella

Description

Bombella intestini strain R-52487 is characterized by having a single replicon, which is an important trait for understanding its genomic structure and stability. The strain is cataloged under the accession number JATM00000000.1, providing a unique identifier for researchers interested in accessing its genomic data. In studying Bombella intestini, it is important to consider its ecological role. This bacterium is known to inhabit the intestines of various organisms, suggesting a potential symbiotic relationship. Such relationships can contribute to the host's digestive processes, nutrient absorption, and overall gut health. The presence of Bombella intestini in the intestines of specific species may indicate its adaptation to particular host environments, emphasizing its potential importance in microbial ecology and host interactions. Understanding the genomic characteristics of Bombella intestini strain R-52487, including its single replicon, could provide insights into its metabolic capabilities and functional roles within the intestinal microbiome. This knowledge may further aid in exploring its contributions to gut health and its potential applications in biotechnology or medicine.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderAcetobacterales
FamilyAcetobacteraceae
GenusBombella
SpeciesBombella intestini
StrainR-52487

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bombella intestini strain R-52487 R-52487_12, whole genome shotgun

Gene Summary

Adenine Count

447260 bp

Thymine Count

464307 bp

Guanine Count

570350 bp

Cytosine Count

541259 bp

Genome Length

2023176 bp

Protein-coding Genes

1574 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAL01_03855Not AvailableNegative803504 - 80393514808.6
pyruvate dehydrogenaseAL01_03860Not AvailableNegative804014 - 80502735766.5
abc transporter substrate-binding proteinAL01_03865Not AvailableNegative805055 - 80601434204.7
hypothetical proteinAL01_03870Not AvailableNegative806300 - 80738537409.6
flagellar hook protein flgkAL01_03875Not AvailableNegative807457 - 80900452631.0
flagellar basal body rod protein flgfAL01_03880Not AvailableNegative809169 - 80992427795.6
flagellar basal body rod protein flggAL01_03885Not AvailablePositive810187 - 81097528330.1
flagellar l-ring protein flghAL01_03895Not AvailablePositive812053 - 81279926497.7
hypothetical proteinAL01_03900Not AvailablePositive812953 - 81345317070.8
flagellar ms-ring proteinAL01_03915Not AvailablePositive814675 - 81627356986.5

Displaying genes 671 – 680 of 1629 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.