Sphingobacterium sp. ML3W

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium sp. ML3W is characterized as a rod-shaped bacterium with a single replicon. This trait suggests a streamlined genomic organization, which may contribute to its adaptability in various environments. The organism is cataloged under the accession number NZ_CP009278.1, indicating its presence in genomic databases, which facilitates further research and identification. Sphingobacterium species are typically known for their role in soil and environmental microbiology, often involved in the degradation of complex organic materials. Their rod shape may provide advantages in mobility and nutrient uptake, allowing them to thrive in diverse ecological niches. The single replicon structure is often associated with prokaryotic organisms that possess efficient replication mechanisms, potentially enhancing their survival and evolutionary adaptability. Understanding the specific ecological roles of Sphingobacterium sp. ML3W can provide insights into soil health and biogeochemical cycles. Given their capabilities, these bacteria may play a significant role in the decomposition processes and nutrient cycling, contributing to the maintenance of ecosystem functions. Their ability to adapt to different environmental conditions further underscores their importance in microbial ecology and bioremediation efforts.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium sp. ML3W
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium sp. ML3W
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium sp. ML3W chromosome, complete genome.

Gene Summary

Adenine Count

1679378 bp

Thymine Count

1676457 bp

Guanine Count

990642 bp

Cytosine Count

982533 bp

Genome Length

5329010 bp

Protein-coding Genes

4438 genes

Non-Coding Genes

122 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
co-chaperone ybbnKO02_RS19620Not AvailablePositive4573725 - 45739588660.53
class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdiKO02_RS19625Not AvailablePositive4573987 - 457439415140.0
class 1b ribonucleoside-diphosphate reductase subunit alphaKO02_RS19630Not AvailablePositive4574354 - 457645980510.6
class 1b ribonucleoside-diphosphate reductase subunit betaKO02_RS19635Not AvailablePositive4576557 - 457754337966.3
m60 family metallopeptidaseKO02_RS19640Not AvailablePositive4577728 - 457953668082.7
ragb/susd family nutrient uptake outer membrane proteinKO02_RS19645Not AvailableNegative4579574 - 458113958270.9
susc/raga family tonb-linked outer membrane proteinKO02_RS19650Not AvailableNegative4581154 - 4584336117948.0
transposaseKO02_RS23665Not AvailableNegative4584716 - 45848926433.62
ragb/susd family nutrient uptake outer membrane proteinKO02_RS19655Not AvailableNegative4584955 - 458658661298.9
tonb-dependent receptorKO02_RS19660Not AvailableNegative4586599 - 4589664112872.0

Displaying genes 3951 – 3960 of 4560 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.