Sphingobacterium sp. ML3W

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium sp. ML3W is characterized as a rod-shaped bacterium with a single replicon. This trait suggests a streamlined genomic organization, which may contribute to its adaptability in various environments. The organism is cataloged under the accession number NZ_CP009278.1, indicating its presence in genomic databases, which facilitates further research and identification. Sphingobacterium species are typically known for their role in soil and environmental microbiology, often involved in the degradation of complex organic materials. Their rod shape may provide advantages in mobility and nutrient uptake, allowing them to thrive in diverse ecological niches. The single replicon structure is often associated with prokaryotic organisms that possess efficient replication mechanisms, potentially enhancing their survival and evolutionary adaptability. Understanding the specific ecological roles of Sphingobacterium sp. ML3W can provide insights into soil health and biogeochemical cycles. Given their capabilities, these bacteria may play a significant role in the decomposition processes and nutrient cycling, contributing to the maintenance of ecosystem functions. Their ability to adapt to different environmental conditions further underscores their importance in microbial ecology and bioremediation efforts.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium sp. ML3W
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium sp. ML3W
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium sp. ML3W chromosome, complete genome.

Gene Summary

Adenine Count

1679378 bp

Thymine Count

1676457 bp

Guanine Count

990642 bp

Cytosine Count

982533 bp

Genome Length

5329010 bp

Protein-coding Genes

4438 genes

Non-Coding Genes

122 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yggs family pyridoxal phosphate-dependent enzymeKO02_RS12400Not AvailablePositive2896208 - 289690026275.8
gnat family n-acetyltransferaseKO02_RS12405Not AvailablePositive2896893 - 289734517236.8
duf3298 and duf4163 domain-containing proteinKO02_RS12410Not AvailablePositive2897369 - 289816930594.8
aspartate kinaseKO02_RS12415Not AvailablePositive2898190 - 289945247909.2
class i sam-dependent methyltransferaseKO02_RS12420Not AvailablePositive2899453 - 290065845001.7
llm class flavin-dependent oxidoreductaseKO02_RS12425Not AvailablePositive2900688 - 290168036257.2
hypothetical proteinKO02_RS22800Not AvailablePositive2901812 - 290263031189.3
duf1345 domain-containing proteinKO02_RS12435Not AvailablePositive2902633 - 290328924590.4
thioredoxinKO02_RS12440Not AvailableNegative2904024 - 290434111693.2
dna polymerase iii subunit alphaKO02_RS12445Not AvailableNegative2904549 - 2908973166477.0

Displaying genes 2531 – 2540 of 4560 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.