Sphingobacterium sp. ML3W

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium sp. ML3W is characterized as a rod-shaped bacterium with a single replicon. This trait suggests a streamlined genomic organization, which may contribute to its adaptability in various environments. The organism is cataloged under the accession number NZ_CP009278.1, indicating its presence in genomic databases, which facilitates further research and identification. Sphingobacterium species are typically known for their role in soil and environmental microbiology, often involved in the degradation of complex organic materials. Their rod shape may provide advantages in mobility and nutrient uptake, allowing them to thrive in diverse ecological niches. The single replicon structure is often associated with prokaryotic organisms that possess efficient replication mechanisms, potentially enhancing their survival and evolutionary adaptability. Understanding the specific ecological roles of Sphingobacterium sp. ML3W can provide insights into soil health and biogeochemical cycles. Given their capabilities, these bacteria may play a significant role in the decomposition processes and nutrient cycling, contributing to the maintenance of ecosystem functions. Their ability to adapt to different environmental conditions further underscores their importance in microbial ecology and bioremediation efforts.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium sp. ML3W
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium sp. ML3W
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium sp. ML3W chromosome, complete genome.

Gene Summary

Adenine Count

1679378 bp

Thymine Count

1676457 bp

Guanine Count

990642 bp

Cytosine Count

982533 bp

Genome Length

5329010 bp

Protein-coding Genes

4438 genes

Non-Coding Genes

122 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arginine decarboxylaseKO02_RS05565Not AvailableNegative1287251 - 128864254198.5
arginine--trna ligaseKO02_RS05570Not AvailablePositive1288752 - 129053667155.3
oxidoreductaseKO02_RS05575Not AvailablePositive1290548 - 129162740529.4
nad(p)/fad-dependent oxidoreductaseKO02_RS05580Not AvailablePositive1291639 - 129283243443.4
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive1292901 - 1293281Not Available
sigma-54-dependent transcriptional regulatorKO02_RS05585Not AvailablePositive1293339 - 129475452730.5
had family hydrolaseKO02_RS05590Not AvailableNegative1294770 - 129543825372.3
acyltransferaseKO02_RS05595Not AvailableNegative1295515 - 129651939554.5
hypothetical proteinKO02_RS05600Not AvailableNegative1296679 - 129705314339.7
hypothetical proteinKO02_RS05605Not AvailablePositive1297290 - 129778718976.2

Displaying genes 1141 – 1150 of 4560 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.