Clostridium sp. NCR

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. NCR is characterized by possessing a single replicon, which can be a significant trait influencing its genetic stability and replication processes. The organism is cataloged under the accession number JQHY00000000.1, providing a reference for genomic studies and facilitating further research into its biology. Clostridium species are known for their anaerobic metabolism and the ability to form spores, which contribute to their survival in various environments, including soil and the gastrointestinal tracts of animals. These traits can be critical for understanding the ecological roles of Clostridium sp. NCR, particularly in nutrient cycling and its interactions within microbial communities. The presence of a single replicon may suggest streamlined genomic architecture, which can impact the organism's adaptability and evolutionary strategies. This trait could be relevant when considering its potential applications in biotechnology or its role in health and disease contexts. Understanding the genomic features of Clostridium sp. NCR may provide insights into its metabolic capabilities and ecological interactions, emphasizing the importance of studying microbial diversity and function in various environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. NCR
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. NCR contig00059, whole genome shotgun sequence.

Gene Summary

Adenine Count

1187206 bp

Thymine Count

1412702 bp

Guanine Count

430005 bp

Cytosine Count

588495 bp

Genome Length

3618408 bp

Protein-coding Genes

3106 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pts cellobiose transporter subunit iicKD33_16430Not AvailablePositive3309574 - 331092947737.6
diacetylchitobiose-6-phosphate hydrolaseKD33_16435Not AvailablePositive3310953 - 331226348788.1
hypothetical proteinKD33_16440Not AvailablePositive3312392 - 331276914101.7
dna-binding proteinKD33_16445Not AvailableNegative3312800 - 331364231593.8
gntr family transcriptional regulatorKD33_16450Not AvailablePositive3313844 - 331457828510.5
n-acetylglucosamine-6-phosphate deacetylaseKD33_16455Not AvailablePositive3314590 - 331572341052.1
spermidine/putrescine abc transporter atp-binding proteinKD33_16470Not AvailablePositive3317356 - 331839939856.6
abc transporter permeaseKD33_16475Not AvailablePositive3318400 - 331924231268.6
spermidine/putrescine abc transporter permeaseKD33_16480Not AvailablePositive3319233 - 332001529194.0
spermidine/putrescine abc transporter substrate-binding proteinKD33_16485Not AvailablePositive3320018 - 332106439716.1

Displaying genes 2871 – 2880 of 3191 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.