Clostridium sp. NCR

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. NCR is characterized by possessing a single replicon, which can be a significant trait influencing its genetic stability and replication processes. The organism is cataloged under the accession number JQHY00000000.1, providing a reference for genomic studies and facilitating further research into its biology. Clostridium species are known for their anaerobic metabolism and the ability to form spores, which contribute to their survival in various environments, including soil and the gastrointestinal tracts of animals. These traits can be critical for understanding the ecological roles of Clostridium sp. NCR, particularly in nutrient cycling and its interactions within microbial communities. The presence of a single replicon may suggest streamlined genomic architecture, which can impact the organism's adaptability and evolutionary strategies. This trait could be relevant when considering its potential applications in biotechnology or its role in health and disease contexts. Understanding the genomic features of Clostridium sp. NCR may provide insights into its metabolic capabilities and ecological interactions, emphasizing the importance of studying microbial diversity and function in various environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. NCR
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. NCR contig00059, whole genome shotgun sequence.

Gene Summary

Adenine Count

1187206 bp

Thymine Count

1412702 bp

Guanine Count

430005 bp

Cytosine Count

588495 bp

Genome Length

3618408 bp

Protein-coding Genes

3106 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hxlr family transcriptional regulatorKD33_06305Not AvailableNegative1272478 - 127282513259.2
oxidoreductaseKD33_06310Not AvailablePositive1272966 - 127368526436.9
short-chain dehydrogenaseKD33_06315Not AvailablePositive1273739 - 127445526661.8
3-ketoacyl-acp reductaseKD33_06320Not AvailablePositive1274592 - 127533226972.3
membrane proteinKD33_06325Not AvailablePositive1275356 - 127605425716.6
hypothetical proteinKD33_06330Not AvailablePositive1276200 - 127652612495.2
na+ dependent nucleoside transporter domain-containing proteinKD33_06335Not AvailablePositive1276760 - 127795641656.8
hypothetical proteinKD33_06340Not AvailablePositive1278175 - 127946749420.4
hypothetical proteinKD33_06350Not AvailableNegative1279734 - 128038123703.1
amino acid abc transporter permeaseKD33_06355Not AvailableNegative1280392 - 128100323033.4

Displaying genes 1161 – 1170 of 3191 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.