Porphyromonas sp. COT-108 OH1349

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Porphyromonas

Description

Porphyromonas sp. COT-108 OH1349 is characterized as a rod-shaped bacterium. This organism possesses flagella, which suggests it has the capability for motility. It contains a single replicon, indicating a relatively simple genomic structure compared to some other bacterial species. The genomic data for Porphyromonas sp. COT-108 OH1349 is accessible under the accession number JRAH00000000.1. This bacterium is part of the genus Porphyromonas, which is known to include species that can be involved in various ecological interactions, particularly in relation to human health. Members of the Porphyromonas genus are often associated with the human oral cavity and can play roles in periodontal disease. The presence of flagella in Porphyromonas sp. COT-108 OH1349 may enhance its ability to navigate through the complex environments in the oral microbiome, potentially influencing its interactions with other microorganisms and host tissues. The study of Porphyromonas sp. COT-108 OH1349 could provide insights into microbial dynamics, particularly in environments where motility is advantageous. Understanding its ecological role may contribute to broader knowledge regarding the microbial communities within the oral cavity and their implications for oral health and disease.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPorphyromonadaceae
GenusPorphyromonas
SpeciesPorphyromonas sp. COT-108 OH1349
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyromonas sp. COT-108 OH1349 contig_43, whole genome shotgun

Gene Summary

Adenine Count

642461 bp

Thymine Count

649613 bp

Guanine Count

520595 bp

Cytosine Count

517859 bp

Genome Length

2330607 bp

Protein-coding Genes

1734 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
excisionaseJT26_00225Not AvailablePositive46520 - 4683412363.1
hypothetical proteinJT26_00230Not AvailablePositive47024 - 4832549565.3
hypothetical proteinJT26_00235Not AvailablePositive48329 - 4891322942.8
transposaseJT26_00245Not AvailablePositive50036 - 5039514077.0
hypothetical proteinJT26_00250Not AvailableNegative50427 - 506247044.38
hypothetical proteinJT26_00255Not AvailableNegative50863 - 511028940.11
dna polymeraseJT26_00265Not AvailableNegative51772 - 5344264713.7
hypothetical proteinJT26_00270Not AvailableNegative54095 - 5452616474.7
transposaseJT26_00275Not AvailablePositive54818 - 5604447233.5
integraseJT26_00280Not AvailablePositive56049 - 5731748858.4

Displaying genes 31 – 40 of 1787 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.