Desulfobulbus sp. Tol-SR

Gram-negativeBacillianaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfobulbia

Order

Desulfobulbales

Family

Desulfobulbaceae

Genus

Desulfobulbus

Description

Desulfobulbus sp. Tol-SR is a Gram-negative, anaerobic bacterium characterized by its bacilli shape. It possesses a single replicon, indicating a streamlined genomic structure that is typical for many bacteria in anaerobic environments. The accession number for this strain is JROS00000000.1, which provides a reference for researchers aiming to study its genetic and metabolic pathways. As an anaerobic organism, Desulfobulbus sp. Tol-SR likely thrives in environments devoid of oxygen, such as sediments or deep subsurface layers where sulfate reduction is prevalent. This bacterium is part of the Desulfobulbus genus, which is known for its role in the biogeochemical cycling of sulfur compounds. By participating in sulfate reduction, Desulfobulbus sp. Tol-SR contributes to the conversion of sulfate to sulfide, a critical process in many anaerobic ecosystems. The ecological significance of Desulfobulbus sp. Tol-SR lies in its potential role in nutrient cycling and organic matter decomposition in anaerobic environments. Its metabolic activities can influence the availability of essential nutrients for other microorganisms and affect the overall health and functioning of the ecosystem. Understanding the specific functions of Desulfobulbus sp. Tol-SR can provide insights into the dynamics of microbial communities in anaerobic habitats and their contributions to biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfobulbia
OrderDesulfobulbales
FamilyDesulfobulbaceae
GenusDesulfobulbus
SpeciesDesulfobulbus sp. Tol-SR
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfobulbus sp. Tol-SR contig_448, whole genome shotgun

Gene Summary

Adenine Count

855751 bp

Thymine Count

858360 bp

Guanine Count

1246882 bp

Cytosine Count

1249591 bp

Genome Length

4211782 bp

Protein-coding Genes

3201 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinJT06_00035Not AvailableNegative7359 - 75929044.78
hypothetical proteinJT06_00040Not AvailableNegative7694 - 78796674.27
sam-dependent methyltransferaseJT06_00045Not AvailablePositive8092 - 908735911.2
8-amino-7-oxononanoate synthaseJT06_00050Not AvailablePositive9440 - 1059741523.0
abc transporter atp-binding proteinJT06_00055Not AvailablePositive10843 - 1260063780.4
sugar abc transporter atp-binding proteinJT06_00060Not AvailableNegative12673 - 1340127132.0
hypothetical proteinJT06_00065Not AvailableNegative13553 - 138049377.45
rmld substrate-binding proteinJT06_00070Not AvailableNegative13824 - 1475033776.9
acyl-coa synthetaseJT06_00075Not AvailableNegative14871 - 1661064341.8
hypothetical proteinJT06_00080Not AvailableNegative16610 - 168859867.39

Displaying genes 11 – 20 of 3248 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.