Desulfobulbus sp. Tol-SR

Gram-negativeBacillianaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfobulbia

Order

Desulfobulbales

Family

Desulfobulbaceae

Genus

Desulfobulbus

Description

Desulfobulbus sp. Tol-SR is a Gram-negative, anaerobic bacterium characterized by its bacilli shape. It possesses a single replicon, indicating a streamlined genomic structure that is typical for many bacteria in anaerobic environments. The accession number for this strain is JROS00000000.1, which provides a reference for researchers aiming to study its genetic and metabolic pathways. As an anaerobic organism, Desulfobulbus sp. Tol-SR likely thrives in environments devoid of oxygen, such as sediments or deep subsurface layers where sulfate reduction is prevalent. This bacterium is part of the Desulfobulbus genus, which is known for its role in the biogeochemical cycling of sulfur compounds. By participating in sulfate reduction, Desulfobulbus sp. Tol-SR contributes to the conversion of sulfate to sulfide, a critical process in many anaerobic ecosystems. The ecological significance of Desulfobulbus sp. Tol-SR lies in its potential role in nutrient cycling and organic matter decomposition in anaerobic environments. Its metabolic activities can influence the availability of essential nutrients for other microorganisms and affect the overall health and functioning of the ecosystem. Understanding the specific functions of Desulfobulbus sp. Tol-SR can provide insights into the dynamics of microbial communities in anaerobic habitats and their contributions to biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfobulbia
OrderDesulfobulbales
FamilyDesulfobulbaceae
GenusDesulfobulbus
SpeciesDesulfobulbus sp. Tol-SR
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfobulbus sp. Tol-SR contig_448, whole genome shotgun

Gene Summary

Adenine Count

855751 bp

Thymine Count

858360 bp

Guanine Count

1246882 bp

Cytosine Count

1249591 bp

Genome Length

4211782 bp

Protein-coding Genes

3201 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinJT06_00810Not AvailablePositive178873 - 17916910618.9
guanylate kinaseJT06_00815Not AvailablePositive179169 - 17978022610.1
trna methyltransferaseJT06_00820Not AvailablePositive179777 - 18058928938.3
30s ribosomal protein s1JT06_00825Not AvailableNegative180642 - 18184443894.9
hypothetical proteinJT06_00830Not AvailableNegative182080 - 18388867307.1
hypothetical proteinJT06_00835Not AvailableNegative183885 - 18461027169.2
glutamate racemaseJT06_00840Not AvailableNegative184607 - 18538929184.5
regulatory protein, fmdb familyJT06_00845Not AvailablePositive185732 - 1860049077.58
s-adenosylmethionine trna ribosyltransferaseJT06_00850Not AvailableNegative186018 - 18712140187.2
1,4-dihydroxy-6-naphthoate synthaseJT06_00860Not AvailablePositive187912 - 18877531059.4

Displaying genes 141 – 150 of 3248 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.