Desulfobulbus sp. Tol-SR

Gram-negativeBacillianaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfobulbia

Order

Desulfobulbales

Family

Desulfobulbaceae

Genus

Desulfobulbus

Description

Desulfobulbus sp. Tol-SR is a Gram-negative, anaerobic bacterium characterized by its bacilli shape. It possesses a single replicon, indicating a streamlined genomic structure that is typical for many bacteria in anaerobic environments. The accession number for this strain is JROS00000000.1, which provides a reference for researchers aiming to study its genetic and metabolic pathways. As an anaerobic organism, Desulfobulbus sp. Tol-SR likely thrives in environments devoid of oxygen, such as sediments or deep subsurface layers where sulfate reduction is prevalent. This bacterium is part of the Desulfobulbus genus, which is known for its role in the biogeochemical cycling of sulfur compounds. By participating in sulfate reduction, Desulfobulbus sp. Tol-SR contributes to the conversion of sulfate to sulfide, a critical process in many anaerobic ecosystems. The ecological significance of Desulfobulbus sp. Tol-SR lies in its potential role in nutrient cycling and organic matter decomposition in anaerobic environments. Its metabolic activities can influence the availability of essential nutrients for other microorganisms and affect the overall health and functioning of the ecosystem. Understanding the specific functions of Desulfobulbus sp. Tol-SR can provide insights into the dynamics of microbial communities in anaerobic habitats and their contributions to biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfobulbia
OrderDesulfobulbales
FamilyDesulfobulbaceae
GenusDesulfobulbus
SpeciesDesulfobulbus sp. Tol-SR
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfobulbus sp. Tol-SR contig_448, whole genome shotgun

Gene Summary

Adenine Count

855751 bp

Thymine Count

858360 bp

Guanine Count

1246882 bp

Cytosine Count

1249591 bp

Genome Length

4211782 bp

Protein-coding Genes

3201 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carnitine dehydrataseJT06_08560Not AvailableNegative1909676 - 191082442577.3
hypothetical proteinJT06_08565Not AvailableNegative1910971 - 19111747429.62
phosphoribosylaminoimidazole synthetaseJT06_08570Not AvailablePositive1911352 - 191240737803.5
cytoplasmic proteinJT06_08575Not AvailableNegative1912471 - 191294416635.3
elongation factor gJT06_08580Not AvailableNegative1913000 - 191506374619.5
virulence factorJT06_08585Not AvailablePositive1915345 - 191694056861.3
hypothetical proteinJT06_08590Not AvailableNegative1916931 - 191725712351.0
dihydrouridine synthaseJT06_08595Not AvailableNegative1917283 - 191824835991.8
hypothetical proteinJT06_08600Not AvailableNegative1918280 - 192064387708.9
hypothetical proteinJT06_08605Not AvailablePositive1921072 - 192189630794.0

Displaying genes 1441 – 1450 of 3248 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.