Pseudomonas sp. AP19

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. AP19 is characterized by having a single replicon, which suggests a streamlined genomic organization. The genetic information for this strain can be found in the accession number LXJP00000000.1, indicating that its genome has been sequenced and made available for further study. The ecological role of Pseudomonas species, including Pseudomonas sp. AP19, typically involves their ability to thrive in diverse environments. Members of the Pseudomonas genus are known for their metabolic versatility, allowing them to degrade a wide variety of organic compounds. This trait makes them important in bioremediation processes, as they can help break down pollutants in contaminated environments. Understanding the specific traits and capabilities of Pseudomonas sp. AP19 could shed light on its potential applications in environmental microbiology and biotechnology. For instance, its single replicon may facilitate genetic manipulation for biotechnological purposes, enhancing its utility in biodegradation or as a bioindicator in ecological studies. The study of such strains is crucial for developing strategies to manage pollution and improve ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. AP19
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. AP19
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. AP19 contig00159, whole genome shotgun sequence.

Gene Summary

Adenine Count

1492000 bp

Thymine Count

1507590 bp

Guanine Count

2202080 bp

Cytosine Count

2192015 bp

Genome Length

7393685 bp

Protein-coding Genes

6447 genes

Non-Coding Genes

248 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysr family transcriptional regulatorA7D21_10805Not AvailablePositive4095095 - 409599132180.9
dihydroxyacetone kinase subunit lA7D21_10810Not AvailableNegative4095948 - 409659522406.9
dihydroxyacetone kinaseA7D21_10815Not AvailableNegative4096599 - 409760035580.1
erythritol/l-threitol dehydrogenaseA7D21_10820Not AvailableNegative4097755 - 409887041018.8
d-threitol dehydrogenaseA7D21_10825Not AvailableNegative4098897 - 409965226279.8
sugar abc transporter substrate-binding proteinA7D21_10830Not AvailableNegative4099808 - 410081535832.7
sugar abc transporter permeaseA7D21_10835Not AvailableNegative4100874 - 410185134084.8
d-xylose abc transporter atp-binding proteinA7D21_10840Not AvailableNegative4101848 - 410333553448.7
ribose 5-phosphate isomerase bA7D21_10845Not AvailablePositive4103619 - 410408016188.4
dna-binding proteinA7D21_10850Not AvailablePositive4104144 - 410512435444.7

Displaying genes 3881 – 3890 of 6695 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.