Pseudomonas sp. AP19

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. AP19 is characterized by having a single replicon, which suggests a streamlined genomic organization. The genetic information for this strain can be found in the accession number LXJP00000000.1, indicating that its genome has been sequenced and made available for further study. The ecological role of Pseudomonas species, including Pseudomonas sp. AP19, typically involves their ability to thrive in diverse environments. Members of the Pseudomonas genus are known for their metabolic versatility, allowing them to degrade a wide variety of organic compounds. This trait makes them important in bioremediation processes, as they can help break down pollutants in contaminated environments. Understanding the specific traits and capabilities of Pseudomonas sp. AP19 could shed light on its potential applications in environmental microbiology and biotechnology. For instance, its single replicon may facilitate genetic manipulation for biotechnological purposes, enhancing its utility in biodegradation or as a bioindicator in ecological studies. The study of such strains is crucial for developing strategies to manage pollution and improve ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. AP19
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. AP19
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. AP19 contig00159, whole genome shotgun sequence.

Gene Summary

Adenine Count

1492000 bp

Thymine Count

1507590 bp

Guanine Count

2202080 bp

Cytosine Count

2192015 bp

Genome Length

7393685 bp

Protein-coding Genes

6447 genes

Non-Coding Genes

248 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
homoserine acetyltransferaseA7D21_23290Not AvailablePositive3959485 - 395991915772.9
non-canonical purine ntp pyrophosphatase, rdgb/ham1 familyA7D21_23295Not AvailablePositive3959916 - 396051221340.6
yggw family oxidoreductaseA7D21_23300Not AvailablePositive3960509 - 396171144193.2
hypothetical proteinA7D21_23305Not AvailablePositive3961729 - 396205211394.4
trna (guanosine(46)-n7)-methyltransferase trmbA7D21_23310Not AvailableNegative3962198 - 396292327129.6
thiazole synthaseA7D21_23315Not AvailableNegative3962933 - 396372728418.9
thiamine biosynthesis protein thisA7D21_23320Not AvailableNegative3963793 - 39639937066.38
hypothetical proteinA7D21_23325Not AvailableNegative3964065 - 396444213303.8
monofunctional biosynthetic peptidoglycan transglycosylaseA7D21_23330Not AvailablePositive3964517 - 396523927208.7
rna polymerase factor sigma-32A7D21_23335Not AvailableNegative3965435 - 396628932593.6

Displaying genes 3751 – 3760 of 6695 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.