Pseudomonas sp. AP19

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. AP19 is characterized by having a single replicon, which suggests a streamlined genomic organization. The genetic information for this strain can be found in the accession number LXJP00000000.1, indicating that its genome has been sequenced and made available for further study. The ecological role of Pseudomonas species, including Pseudomonas sp. AP19, typically involves their ability to thrive in diverse environments. Members of the Pseudomonas genus are known for their metabolic versatility, allowing them to degrade a wide variety of organic compounds. This trait makes them important in bioremediation processes, as they can help break down pollutants in contaminated environments. Understanding the specific traits and capabilities of Pseudomonas sp. AP19 could shed light on its potential applications in environmental microbiology and biotechnology. For instance, its single replicon may facilitate genetic manipulation for biotechnological purposes, enhancing its utility in biodegradation or as a bioindicator in ecological studies. The study of such strains is crucial for developing strategies to manage pollution and improve ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. AP19
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. AP19
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. AP19 contig00159, whole genome shotgun sequence.

Gene Summary

Adenine Count

1492000 bp

Thymine Count

1507590 bp

Guanine Count

2202080 bp

Cytosine Count

2192015 bp

Genome Length

7393685 bp

Protein-coding Genes

6447 genes

Non-Coding Genes

248 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
guanine permeaseA7D21_21590Not AvailablePositive1173335 - 117463044848.3
trna (uridine(54)-c5)-methyltransferase trmaA7D21_21595Not AvailablePositive1174627 - 117570640795.5
hypothetical proteinA7D21_21600Not AvailableNegative1175713 - 117615315481.8
duf4160 domain-containing proteinA7D21_21605Not AvailableNegative1176150 - 117657816336.9
type ii 3-dehydroquinate dehydrataseA7D21_21610Not AvailablePositive1176852 - 117729215777.0
shikimate dehydrogenaseA7D21_21615Not AvailablePositive1177298 - 117815230597.0
tetr family transcriptional regulatorA7D21_21620Not AvailableNegative1178212 - 117887725614.6
4-hydroxyphenylpyruvate dioxygenaseA7D21_21625Not AvailableNegative1178954 - 118085570009.1
hypothetical proteinA7D21_21630Not AvailablePositive1181081 - 118241548878.7
hypothetical proteinA7D21_21635Not AvailableNegative1182417 - 118329531846.2

Displaying genes 1271 – 1280 of 6695 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.