Vibrio sp. B183

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. B183 is characterized by having a single replicon, which indicates a streamlined genomic structure. This trait can influence its genetic stability and adaptability in various environments. The organism is cataloged under the accession JPQB00000000.1, which serves as a unique identifier in genomic databases for further reference and study. Understanding Vibrio sp. B183's replicon configuration may provide insights into its ecological roles and interactions within its habitat. Vibrio species are typically associated with aquatic environments, where they can play significant roles in nutrient cycling and as part of the microbial community. Their single replicon may suggest a potential for rapid adaptation to environmental changes, allowing them to thrive in varying conditions. The study of Vibrio sp. B183 and its traits can contribute to a broader understanding of Vibrio species ecology, including their interactions with other microorganisms and their significance in aquatic ecosystems. This knowledge is essential for evaluating the impacts of environmental changes, such as pollution or climate shifts, on microbial communities and their functions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. B183
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. B183
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. B183 contig_52, whole genome shotgun sequence.

Gene Summary

Adenine Count

1531799 bp

Thymine Count

1529001 bp

Guanine Count

1259452 bp

Cytosine Count

1259748 bp

Genome Length

5580083 bp

Protein-coding Genes

4877 genes

Non-Coding Genes

116 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diguanylate cyclaseIX95_20780Not AvailableNegative4470777 - 447199445910.7
dna polymerase ivIX95_20785Not AvailablePositive4472152 - 447321940642.4
atp-dependent dna helicase recqIX95_20790Not AvailableNegative4473226 - 447515772690.5
transcription elongation factorIX95_20795Not AvailablePositive4475235 - 447571117739.0
chemotaxis proteinIX95_20800Not AvailablePositive4475768 - 447651127813.6
chitinaseIX95_20805Not AvailableNegative4476551 - 447909488394.2
transporterIX95_20810Not AvailablePositive4479427 - 448079148985.2
deacylaseIX95_20815Not AvailableNegative4480860 - 448195139765.3
ribosomal protein s6 modification proteinIX95_20820Not AvailableNegative4481911 - 448281632542.9
ribosomal protein s6 modification proteinIX95_20825Not AvailableNegative4482813 - 448325617190.7

Displaying genes 3961 – 3970 of 4993 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

67 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da
BASm0001697(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4Chemical structure of (S)-4,5-dihydroxypentane-2,3-dioneNot available
Average132.1146Da
Monoisotopic132.042258744Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001767oxalateC2O4Chemical structure of oxalateNot available
Average88.019Da
Monoisotopic87.979658488Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da

Displaying 1–10 of 67 metabolites

Health Effects

No health effects information available for this bacterium.