Vogesella sp. EB

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Chromobacteriaceae

Genus

Vogesella

Description

Vogesella sp. EB is characterized by having a single replicon, which is a notable trait among its genetic features. The genomic data for this organism can be referenced under the accession number LFDT00000000.1. The limited information available suggests that Vogesella sp. EB may belong to a broader category of bacteria known for their specific ecological niches, potentially playing roles in various biological processes. While the precise ecological function of Vogesella sp. EB remains unclear, the presence of a single replicon might indicate streamlined genetic regulation and adaptability to its environment. In summary, Vogesella sp. EB, with its single replicon and the associated genomic data, presents an intriguing subject for further study in microbial ecology and genetics. Understanding its traits could provide insights into the evolutionary strategies of bacteria within its group.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyChromobacteriaceae
GenusVogesella
SpeciesVogesella sp. EB
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vogesella sp. EB
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vogesella sp. EB contig00075, whole genome shotgun sequence.

Gene Summary

Adenine Count

638072 bp

Thymine Count

623402 bp

Guanine Count

1129272 bp

Cytosine Count

1149417 bp

Genome Length

3540164 bp

Protein-coding Genes

3117 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
LysinACG97_01095P51771Negative232654 - 23315117946.6
Holin gp22ACG97_01100P51773Negative233211 - 2334899571.03
Tail proteinACG97_01105P10312Negative233544 - 23459337638.2
Tail proteinACG97_01110Not AvailableNegative234597 - 2347916804.93
Tail proteinACG97_01115Not AvailableNegative234778 - 23552426099.1
Tail length tape measure proteinACG97_01120Not AvailableNegative235649 - 23858599974.8
hypothetical proteinACG97_01125Not AvailablePositive238598 - 2387956771.58
Tail proteinACG97_01135Not AvailableNegative239248 - 23975117832.5
Tail sheath proteinACG97_01140Q02TE1Negative239764 - 24093041182.9
Hypothetical proteinACG97_01145Not AvailableNegative241017 - 2412719015.62

Displaying genes 1 – 10 of 3215 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

221 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000288aminohydroquinoneC6H7NO2Chemical structure of aminohydroquinoneNot available
Average125.127Da
Monoisotopic125.0476785Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000344(2R,3S)-homoisocitrateC7H7O7Chemical structure of (2R,3S)-homoisocitrateNot available
Average203.128Da
Monoisotopic203.020823305Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 221 metabolites

Health Effects

No health effects information available for this bacterium.