Pseudomonas sp. EGD-AKN5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. EGD-AKN5 is characterized by having a single replicon, which indicates a streamlined genomic structure that may influence its metabolic capabilities and adaptability. The genomic information for this strain is available under the accession number LZYC00000000.1, providing a resource for further study into its genetic composition and functional traits. The traits of Pseudomonas species are often linked to their ecological versatility, allowing them to thrive in various environments. This adaptability can be attributed to their metabolic diversity, enabling them to utilize a wide range of substrates. Strains within the Pseudomonas genus are known for their roles in nutrient cycling and bioremediation, suggesting that Pseudomonas sp. EGD-AKN5 may also contribute to these ecological functions. Understanding the genomic organization and capabilities of Pseudomonas sp. EGD-AKN5 could provide insights into its potential applications in environmental biotechnology or agriculture. The strain's single replicon may reflect a specialization that could enhance its efficiency in specific ecological niches or biotechnological processes. Further research into its metabolic pathways and ecological interactions could unveil additional roles it plays in its environment, reinforcing the importance of studying microbial diversity in ecological and applied microbiology contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. EGD-AKN5
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. EGD-AKN5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. EGD-AKN5 Scaffold_9, whole genome shotgun

Gene Summary

Adenine Count

1157898 bp

Thymine Count

1178309 bp

Guanine Count

2385385 bp

Cytosine Count

2359491 bp

Genome Length

7090847 bp

Protein-coding Genes

2243 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
spermidine/putrescine abc transporter substrate-binding proteinBAE52_23925Not AvailablePositive870531 - 87156537181.3
allantoin permeaseBAE52_23930Not AvailablePositive871627 - 87301849491.1
acetoin utilization proteinBAE52_23935Not AvailablePositive873015 - 87412739735.4
hypothetical proteinBAE52_23940Not AvailableNegative874135 - 87470720858.9
formaldehyde dehydrogenase, glutathione-independentBAE52_23945Not AvailableNegative875150 - 87634942138.7
formyltetrahydrofolate deformylaseBAE52_23950Not AvailableNegative876504 - 87736132274.7
sarcosine oxidase subunit gammaBAE52_23955Not AvailableNegative877417 - 87805223055.7
sarcosine oxidase subunit alphaBAE52_23960Not AvailableNegative878162 - 881182109718.0
sarcosine oxidase subunit deltaBAE52_23965Not AvailableNegative881185 - 88150812176.3
sarcosine oxidase subunit betaBAE52_23970Not AvailableNegative881522 - 88277245157.9

Displaying genes 761 – 770 of 2243 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.