Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Erythrobacteraceae
Genus
Porphyrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Erythrobacteraceae |
| Genus | Porphyrobacter |
| Species | Porphyrobacter sp. AAP60 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
608753 bp
Thymine Count
603988 bp
Guanine Count
1019254 bp
Cytosine Count
1021742 bp
Genome Length
3253737 bp
Protein-coding Genes
2867 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IP79_12160 | Not Available | Positive | 2578004 - 2578291 | 10330.0 |
| hypothetical protein | IP79_12165 | Not Available | Negative | 2578303 - 2578785 | 17360.6 |
| nad-dependent deacetylase | IP79_12170 | Q9KRX4 | Negative | 2578821 - 2579531 | 25967.0 |
| 4-hydroxy-tetrahydrodipicolinate reductase | IP79_12175 | Q5NPM9 | Positive | 2579638 - 2580366 | 24823.8 |
| endonuclease iii | IP79_12180 | P44319 | Positive | 2580377 - 2581051 | 24978.2 |
| hypothetical protein | IP79_12185 | Not Available | Positive | 2581106 - 2581507 | 14324.3 |
| glutamate:proton symporter | IP79_12190 | O07605 | Negative | 2581514 - 2582749 | 42923.2 |
| succinyl-diaminopimelate desuccinylase | IP79_12195 | Q2N7X8 | Negative | 2582751 - 2583914 | 40616.7 |
| transcriptional regulator | IP79_12200 | Not Available | Positive | 2583944 - 2584390 | 16193.9 |
| endonuclease | IP79_12205 | Not Available | Negative | 2584387 - 2585265 | 31980.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
