Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Erythrobacteraceae
Genus
Porphyrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Erythrobacteraceae |
| Genus | Porphyrobacter |
| Species | Porphyrobacter sp. AAP60 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
608753 bp
Thymine Count
603988 bp
Guanine Count
1019254 bp
Cytosine Count
1021742 bp
Genome Length
3253737 bp
Protein-coding Genes
2867 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma-70 | IP79_11470 | P50512 | Positive | 2433185 - 2433979 | 30142.3 |
| monofunctional biosynthetic peptidoglycan transglycosylase | IP79_11475 | Q9ABA6 | Positive | 2434163 - 2434834 | 24670.6 |
| cobalt transporter | IP79_11480 | P75757 | Positive | 2434841 - 2435809 | 33766.9 |
| rna polymerase subunit sigma | IP79_11485 | A1TEV0 | Positive | 2435809 - 2436396 | 21396.6 |
| hypothetical protein | IP79_11490 | Not Available | Positive | 2436393 - 2437172 | 26607.4 |
| fasciclin | IP79_11495 | P74615 | Positive | 2437409 - 2437903 | 16402.6 |
| atp-dependent clp protease atp-binding subunit clpx | IP79_11500 | Q2NDC1 | Negative | 2438113 - 2439378 | 46092.6 |
| clp protease | IP79_11505 | Q2G3T3 | Negative | 2439576 - 2440280 | 25501.5 |
| amidase | IP79_11510 | Q67KJ2 | Positive | 2440455 - 2442002 | 54340.4 |
| trigger factor | IP79_11515 | Q2NDC7 | Negative | 2442021 - 2443604 | 56928.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
