Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Erythrobacteraceae
Genus
Porphyrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Erythrobacteraceae |
| Genus | Porphyrobacter |
| Species | Porphyrobacter sp. AAP60 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
608753 bp
Thymine Count
603988 bp
Guanine Count
1019254 bp
Cytosine Count
1021742 bp
Genome Length
3253737 bp
Protein-coding Genes
2867 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | IP79_11260 | Q54IM8 | Positive | 2389174 - 2390319 | 41663.8 |
| enoyl-coa hydratase | IP79_11265 | A2VDC2 | Positive | 2390340 - 2391395 | 38198.2 |
| enoyl-coa hydratase | IP79_11270 | Q52995 | Positive | 2391392 - 2392186 | 28393.4 |
| 3-hydroxyisobutyrate dehydrogenase | IP79_11275 | P63936 | Positive | 2392314 - 2393180 | 29504.5 |
| hypothetical protein | IP79_11280 | Not Available | Negative | 2393177 - 2393902 | 25871.2 |
| udp-n-acetyl-d-mannosaminuronic acid dehydrogenase | IP79_11290 | P67066 | Negative | 2394917 - 2396221 | 46091.3 |
| glycosyl transferase | IP79_11295 | Not Available | Negative | 2396326 - 2397513 | 44288.7 |
| gdp-mannose dehydrogenase | IP79_11300 | Q88NC4 | Negative | 2397585 - 2398850 | 44757.4 |
| carnitine dehydratase | IP79_11305 | O06543 | Positive | 2399038 - 2400120 | 37907.2 |
| dehydratase | IP79_11310 | Q3IZ78 | Positive | 2400120 - 2400569 | 16750.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
