Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Erythrobacteraceae
Genus
Porphyrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Erythrobacteraceae |
| Genus | Porphyrobacter |
| Species | Porphyrobacter sp. AAP60 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
608753 bp
Thymine Count
603988 bp
Guanine Count
1019254 bp
Cytosine Count
1021742 bp
Genome Length
3253737 bp
Protein-coding Genes
2867 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase | IP79_10465 | Not Available | Positive | 2227532 - 2228095 | 20366.2 |
| transcriptional regulator | IP79_10470 | P11671 | Positive | 2228293 - 2228631 | 11925.5 |
| ammonia channel protein | IP79_10475 | P69680 | Positive | 2228644 - 2230002 | 46530.1 |
| glucose-methanol-choline oxidoreductase | IP79_10480 | Q9WWW2 | Negative | 2230260 - 2231849 | 56877.2 |
| c-5 sterol desaturase | IP79_10485 | P68434 | Negative | 2231875 - 2232837 | 36932.1 |
| hypothetical protein | IP79_10490 | Not Available | Negative | 2232830 - 2233237 | 14235.1 |
| hypothetical protein | IP79_10495 | Q8UAA9 | Negative | 2233269 - 2233700 | 14865.6 |
| cold-shock protein | IP79_10500 | Not Available | Positive | 2233960 - 2234724 | 26087.3 |
| acetylornithine aminotransferase | IP79_10505 | Q98BB7 | Positive | 2234857 - 2236056 | 42888.6 |
| ornithine carbamoyltransferase | IP79_10510 | Q2G3J8 | Positive | 2236053 - 2237006 | 33323.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
