Allobosea sp. AAP35

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Alloboseaceae

Genus

Allobosea

Description

Allobosea sp. AAP35 is characterized as a Gram-negative bacterium with a rod-shaped morphology. This classification indicates that the organism possesses a thin peptidoglycan layer surrounded by an outer membrane, a hallmark of Gram-negative bacteria, which can influence its interaction with the environment and susceptibility to antibiotics. The strain AAP35 has a unique genomic feature, possessing a single replicon. This characteristic suggests a streamlined genetic organization, which could impact its replication and adaptation processes. The genomic data for Allobosea sp. AAP35 can be accessed through the accession number LJHQ00000000.1, providing a resource for further exploration of its genetic makeup and potential functional traits. In terms of ecological significance, the characteristics of Allobosea sp. AAP35 may offer insights into its role within its environment. Gram-negative bacteria, particularly rod-shaped types, are often involved in various ecological roles, including nutrient cycling and interactions with other microorganisms. Understanding the traits of Allobosea sp. AAP35 can contribute to a broader comprehension of microbial diversity and the functions that such organisms serve in their ecosystems. Further research into its specific ecological interactions and contributions will be vital in elucidating its role within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyAlloboseaceae
GenusAllobosea
SpeciesAllobosea sp. AAP35
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bosea sp. AAP35 AAP35_Contigs_83, whole genome shotgun sequence.

Gene Summary

Adenine Count

758501 bp

Thymine Count

754734 bp

Guanine Count

1472449 bp

Cytosine Count

1476300 bp

Genome Length

4461984 bp

Protein-coding Genes

3965 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Dna packaging/head-tail-connectorIP69_17585Not AvailableNegative3738944 - 373951320341.7
hypothetical proteinIP69_17590Not AvailablePositive3739584 - 374036325823.0
hypothetical proteinIP69_17595Not AvailablePositive3740402 - 374127130257.5
Major capsid proteinIP69_17600Not AvailableNegative3741296 - 374254044314.4
16s ribosomal rnaNot AvailableNot AvailablePositive337 - 1836Not Available
oxidoreductaseIP69_00005Not AvailableNegative588 - 160737303.6
23s ribosomal rnaNot AvailableNot AvailablePositive2553 - 5368Not Available
oxidoreductaseIP69_00010Q44258Negative1619 - 265036392.7
hypothetical proteinIP69_00015Q9KR66Negative2668 - 393343446.2
5s ribosomal rnaNot AvailableNot AvailablePositive5492 - 5606Not Available

Displaying genes 11 – 20 of 4023 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

307 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 307 metabolites

Health Effects

No health effects information available for this bacterium.