Sphingomonas sp. AAP5

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. AAP5 is a rod-shaped bacterium characterized by the presence of flagella, which facilitate its motility. This organism possesses a notably complex genomic structure, containing four replicons, indicative of a significant level of genomic organization and potential adaptability in various environments. The genomic data for Sphingomonas sp. AAP5 is cataloged under multiple accessions: NZ_CP037915.1, NZ_CP037913.1, NZ_CP037914.1, and NZ_CP037916.1, reflecting its sequenced genomic information available in scientific databases. The presence of flagella suggests that Sphingomonas sp. AAP5 is capable of active movement, which can be advantageous in diverse ecological niches, allowing the bacterium to navigate toward nutrients or away from harmful substances. The rod shape of this organism is typical for many members of the Sphingomonadaceae family, which are often associated with various environmental settings, including soil and water. In a broader ecological context, the ability of Sphingomonas sp. AAP5 to move and adapt may play a crucial role in its survival and interaction with other microorganisms, influencing microbial communities and nutrient cycling in its habitat. Understanding the traits of this bacterium can provide insights into its ecological role, particularly in environments where it may contribute to biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. AAP5
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. AAP5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. AAP5 chromosome, complete genome.

Gene Summary

Adenine Count

676348 bp

Thymine Count

672917 bp

Guanine Count

1319676 bp

Cytosine Count

1318426 bp

Genome Length

3987367 bp

Protein-coding Genes

3675 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
magnesium chelatase subunit dE2E30_RS16230Not AvailablePositive3499939 - 350161857577.3
alpha/beta fold hydrolase bchoE2E30_RS16235Not AvailablePositive3501615 - 350248730470.0
hypothetical proteinE2E30_RS16240Not AvailablePositive3502477 - 35026657058.51
hydrataseE2E30_RS16245Not AvailableNegative3502612 - 350354434862.1
1-hydroxycarotenoid 3,4-desaturase crtdE2E30_RS16250Not AvailableNegative3503445 - 350500754250.9
methyltransferaseE2E30_RS16255Not AvailablePositive3505076 - 350620939637.1
chlorophyll synthesis pathway protein bchcE2E30_RS16260Not AvailablePositive3506301 - 350722732212.8
chlorophyllide a reductase iron protein subunit xE2E30_RS16265Not AvailablePositive3507224 - 350820734740.8
chlorophyllide a reductase subunit yE2E30_RS16270Not AvailablePositive3508197 - 350974453943.6
chlorophyllide a reductase subunit zE2E30_RS16275Not AvailablePositive3509741 - 351118652428.1

Displaying genes 3291 – 3300 of 4155 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.