Sphingomonas sp. AAP5

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. AAP5 is a rod-shaped bacterium characterized by the presence of flagella, which facilitate its motility. This organism possesses a notably complex genomic structure, containing four replicons, indicative of a significant level of genomic organization and potential adaptability in various environments. The genomic data for Sphingomonas sp. AAP5 is cataloged under multiple accessions: NZ_CP037915.1, NZ_CP037913.1, NZ_CP037914.1, and NZ_CP037916.1, reflecting its sequenced genomic information available in scientific databases. The presence of flagella suggests that Sphingomonas sp. AAP5 is capable of active movement, which can be advantageous in diverse ecological niches, allowing the bacterium to navigate toward nutrients or away from harmful substances. The rod shape of this organism is typical for many members of the Sphingomonadaceae family, which are often associated with various environmental settings, including soil and water. In a broader ecological context, the ability of Sphingomonas sp. AAP5 to move and adapt may play a crucial role in its survival and interaction with other microorganisms, influencing microbial communities and nutrient cycling in its habitat. Understanding the traits of this bacterium can provide insights into its ecological role, particularly in environments where it may contribute to biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. AAP5
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. AAP5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. AAP5 chromosome, complete genome.

Gene Summary

Adenine Count

676348 bp

Thymine Count

672917 bp

Guanine Count

1319676 bp

Cytosine Count

1318426 bp

Genome Length

3987367 bp

Protein-coding Genes

3675 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tade/tadg family type iv pilus assembly proteinE2E30_RS08720Not AvailablePositive1902008 - 190273625982.9
pyruvate dehydrogenase complex e1 component subunit betaE2E30_RS08725Not AvailableNegative1902754 - 190415450006.1
pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alphaE2E30_RS08730Not AvailableNegative1904154 - 190520038198.5
mfs transporterE2E30_RS08735Not AvailablePositive1905456 - 190673944415.1
cysteine synthase aE2E30_RS08740Not AvailablePositive1906736 - 190765632525.2
cell wall hydrolaseE2E30_RS08745Not AvailablePositive1907951 - 190927647473.9
hypothetical proteinE2E30_RS08750Not AvailableNegative1909331 - 190969313140.2
hypothetical proteinE2E30_RS08755Not AvailablePositive1909895 - 191026312929.5
acyl-coa dehydrogenase c-terminal domain-containing proteinE2E30_RS08760Not AvailableNegative1910649 - 191245164219.9
merr family transcriptional regulatorE2E30_RS08765Not AvailableNegative1912451 - 191287016027.9

Displaying genes 1771 – 1780 of 4155 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.