bacterium YEK0313

Kingdom

Phylum

Class

Order

Family

Genus

Description

Bacterium YEK0313 is characterized by having a single replicon, indicating that it possesses a single circular chromosome responsible for its genetic information. The accession number for YEK0313 is CCMO00000000.2, which serves as a unique identifier in genomic databases, providing a reference point for researchers interested in studying this organism. The presence of only one replicon suggests a streamlined genetic organization, which can be advantageous for the bacterium in terms of replication efficiency and stability. This trait may impact its adaptability and evolutionary dynamics, allowing for quicker responses to environmental changes compared to bacteria with multiple replicons. Understanding the genetic structure of YEK0313 could provide insights into its ecological role and potential applications. For instance, the simplicity of its replicon might indicate a specialization in specific niches or environments, which could be further investigated to uncover its interactions within microbial communities. The study of YEK0313 may also contribute to broader microbiological knowledge, particularly in understanding how genetic organization influences bacterial behavior and ecology.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

bacterium YEK0313 genome assembly Rasbobacterium massiliensis,

Gene Summary

Adenine Count

1138402 bp

Thymine Count

1123191 bp

Guanine Count

2417527 bp

Cytosine Count

2449013 bp

Genome Length

7130785 bp

Protein-coding Genes

6530 genes

Non-Coding Genes

121 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridoxamine 5'-phosphate oxidaseBN1110_00448Not AvailableNegative477680 - 47860633364.6
glutathione s-transferase gstbBN1110_00449Not AvailableNegative478642 - 47926522557.4
hth-type transcriptional regulator dmlrBN1110_00450Not AvailablePositive479373 - 48026631912.9
spermidine/putrescine import atp-binding protein potaBN1110_00451Not AvailableNegative480520 - 48163839811.1
trehalose transport system permease protein sugbBN1110_00452Not AvailableNegative481645 - 48243328182.5
putrescine transport system permease protein pothBN1110_00453Not AvailableNegative482430 - 48328430626.0
n-substituted formamide deformylase precursorBN1110_00454Not AvailableNegative483281 - 48490658850.9
spermidine/putrescine abc transporter periplasmic substrate-binding proteinBN1110_00455Not AvailableNegative484991 - 48610039590.5
putative hth-type transcriptional regulator ydfhBN1110_00456Not AvailablePositive486445 - 48708623889.2
cupin domain proteinBN1110_00457Not AvailablePositive487355 - 48775014212.5

Displaying genes 541 – 550 of 6651 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.