Pantoea sp. 3.5.1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. 3.5.1 is characterized by the presence of flagella, which enables motility and potentially contributes to its ecological adaptability. The organism has a single replicon, indicating a streamlined genetic architecture that may reflect its evolutionary adaptations. The genome of Pantoea sp. 3.5.1 is accessible under the accession number JMRT00000000.3, providing a basis for further genomic analysis and research. Pantoea species are known for their diverse roles in various environments, including plant-associated habitats and as opportunistic pathogens. The motility conferred by flagella can facilitate colonization of plant surfaces or contribute to interactions within microbial communities. Additionally, the single replicon structure could suggest efficient replication and maintenance of essential genetic information, which is advantageous in fluctuating environments. This combination of motility and genetic organization supports the hypothesis that Pantoea sp. 3.5.1 plays a significant role in its ecological niche, potentially contributing to nutrient cycling or plant health. The presence of flagella may enhance its ability to navigate through soil or plant tissues, impacting its survival and ecological interactions. Understanding these traits provides insight into the adaptive strategies of Pantoea sp. 3.5.1 and its potential implications in agricultural and environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. 3.5.1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea sp. 3.5.1 NODE_29_length_234_cov_751.112150, whole genome

Gene Summary

Adenine Count

1100239 bp

Thymine Count

1099718 bp

Guanine Count

1389244 bp

Cytosine Count

1384952 bp

Genome Length

4974348 bp

Protein-coding Genes

4453 genes

Non-Coding Genes

181 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arnfEP46_0021550Not AvailableNegative4604031 - 460439913392.0
4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arneEP46_0021555Not AvailableNegative4604396 - 460471911560.9
lipid iv(a) 4-amino-4-deoxy-l-arabinosyltransferaseEP46_0021560Not AvailableNegative4604719 - 460638061758.9
4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylaseEP46_0021565Not AvailableNegative4606371 - 460728833848.8
bifunctional udp-4-amino-4-deoxy-l-arabinose formyltransferase/udp-glucuronic acid oxidase arnaEP46_0021570Not AvailableNegative4607285 - 460926774841.3
undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferaseEP46_0021575Not AvailableNegative4609264 - 461025937045.1
udp-4-amino-4-deoxy-l-arabinose aminotransferaseEP46_0021580Not AvailableNegative4610252 - 461139741734.4
ycei family proteinEP46_0021585Not AvailablePositive4612175 - 461275320722.9
hypothetical proteinEP46_0021590Not AvailableNegative4612771 - 461355028932.7
sigma-70 family rna polymerase sigma factorEP46_0021595Not AvailableNegative4613547 - 461399616736.0

Displaying genes 4341 – 4350 of 4634 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.