Lachnospiraceae bacterium XBB1006

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Description

Lachnospiraceae bacterium XBB1006 is characterized by having a single replicon, indicating a streamlined genetic structure. Its genomic information is cataloged under the accession number FOXT00000000.1, which provides a reference for researchers looking to access its genetic data. The Lachnospiraceae family is known for its role in the gut microbiome, contributing to the fermentation of dietary fibers and the production of short-chain fatty acids, which are important for gut health. While specific metabolic capabilities of Lachnospiraceae bacterium XBB1006 are not detailed in the provided information, members of this family are generally involved in anaerobic fermentation processes. Understanding the traits of Lachnospiraceae bacterium XBB1006 may provide insights into its ecological role in its natural habitat, particularly in relation to the human gut microbiome or other environments where it may be found. As part of the Lachnospiraceae family, it likely participates in complex interactions with other microorganisms and contributes to the overall health of the microbiome through its metabolic activities. This underscores the importance of studying such bacteria for their potential implications in health and disease, particularly in relation to gut microbiota composition and function.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lachnospiraceae bacterium XBB1006 genome assembly, contig:

Gene Summary

Adenine Count

795907 bp

Thymine Count

778922 bp

Guanine Count

595035 bp

Cytosine Count

549798 bp

Genome Length

2721984 bp

Protein-coding Genes

2570 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
site-specific recombinase xerdSAMN02910358_02550Not AvailableNegative2616948 - 261814746905.6
dna binding domain-containing protein, excisionase familySAMN02910358_02551Not AvailableNegative2618276 - 26184918282.87
dna replication protein dnacSAMN02910358_02552Not AvailableNegative2618495 - 261929830664.7
replication initiator protein a (repa) n-terminusSAMN02910358_02553Not AvailableNegative2619298 - 261981319271.9
hypothetical proteinSAMN02910358_02554Not AvailableNegative2619817 - 262078538593.6
conserved hypothetical integral membrane proteinSAMN02910358_02555Not AvailableNegative2622128 - 262316536644.2
dna-binding transcriptional regulator, lysr familySAMN02910358_02556Not AvailablePositive2623277 - 262416434152.9
integrase core domain-containing proteinSAMN02910358_02557Not AvailableNegative2624303 - 26245379345.17
predicted aaa-atpaseSAMN02910358_02558Not AvailableNegative2624538 - 262574647078.1
pd-(d/e)xk nuclease superfamily proteinSAMN02910358_02559Not AvailableNegative2626089 - 262661320011.8

Displaying genes 2531 – 2540 of 2626 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.