Lachnospiraceae bacterium XBB1006

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Description

Lachnospiraceae bacterium XBB1006 is characterized by having a single replicon, indicating a streamlined genetic structure. Its genomic information is cataloged under the accession number FOXT00000000.1, which provides a reference for researchers looking to access its genetic data. The Lachnospiraceae family is known for its role in the gut microbiome, contributing to the fermentation of dietary fibers and the production of short-chain fatty acids, which are important for gut health. While specific metabolic capabilities of Lachnospiraceae bacterium XBB1006 are not detailed in the provided information, members of this family are generally involved in anaerobic fermentation processes. Understanding the traits of Lachnospiraceae bacterium XBB1006 may provide insights into its ecological role in its natural habitat, particularly in relation to the human gut microbiome or other environments where it may be found. As part of the Lachnospiraceae family, it likely participates in complex interactions with other microorganisms and contributes to the overall health of the microbiome through its metabolic activities. This underscores the importance of studying such bacteria for their potential implications in health and disease, particularly in relation to gut microbiota composition and function.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lachnospiraceae bacterium XBB1006 genome assembly, contig:

Gene Summary

Adenine Count

795907 bp

Thymine Count

778922 bp

Guanine Count

595035 bp

Cytosine Count

549798 bp

Genome Length

2721984 bp

Protein-coding Genes

2570 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dipeptidase dSAMN02910358_00155Not AvailablePositive153165 - 15461353188.2
16s rrna pseudouridine516 synthaseSAMN02910358_00156Not AvailablePositive154706 - 15542226633.3
haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)eSAMN02910358_00157Not AvailablePositive155438 - 15608524705.4
uncharacterized radical sam protein ygiqSAMN02910358_00158Not AvailablePositive156095 - 15799072069.1
23s rrna pseudouridine955/2504/2580 synthaseSAMN02910358_00159Not AvailablePositive158007 - 15888833090.8
probable phosphoglycerate mutaseSAMN02910358_00160Not AvailablePositive158885 - 15955925915.6
recombination protein uSAMN02910358_00161Not AvailablePositive159517 - 16004720778.9
phosphoribosyl-atp pyrophosphatase /phosphoribosyl-amp cyclohydrolaseSAMN02910358_00162Not AvailablePositive160060 - 16135850161.3
radical sam family uncharacterized proteinSAMN02910358_00163Not AvailablePositive161373 - 16323871519.0
radical sam-linked proteinSAMN02910358_00164Not AvailablePositive163222 - 16395627905.7

Displaying genes 161 – 170 of 2626 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.