Lachnospiraceae bacterium XPB1003

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Description

Lachnospiraceae bacterium XPB1003 is a member of the Lachnospiraceae family, characterized by having a single replicon. The organism is cataloged under the accession number FMVK00000000.1. This accession provides a reference point for further studies and analysis of its genetic and phenotypic traits. The Lachnospiraceae family is known for its role in the gut microbiome, where it contributes to the fermentation of dietary fibers and the production of short-chain fatty acids, which are important for host health. While specific metabolic pathways or ecological roles of Lachnospiraceae bacterium XPB1003 are not detailed in the provided evidence, its classification suggests it may share similar functional characteristics with other members of the family. Understanding the properties of Lachnospiraceae bacterium XPB1003 can provide insights into the diversity and functionality of gut microbiota. Given the importance of Lachnospiraceae in maintaining gut health and its potential implications in various health conditions, further exploration of this bacterium could enhance our knowledge of microbial interactions within the gut ecosystem.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lachnospiraceae bacterium XPB1003 genome assembly, contig:

Gene Summary

Adenine Count

899208 bp

Thymine Count

882154 bp

Guanine Count

698613 bp

Cytosine Count

663974 bp

Genome Length

3145544 bp

Protein-coding Genes

2827 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate kinaseSAMN02910370_01034Not AvailablePositive1188558 - 118908519339.6
3-dehydroquinate dehydrataseSAMN02910370_01035Not AvailablePositive1189162 - 118960816622.8
elongation factor pSAMN02910370_01036Not AvailablePositive1189735 - 119029220590.5
hypothetical proteinSAMN02910370_01037Not AvailablePositive1190395 - 119141137961.4
Trna-argNot AvailableNot AvailablePositive1191573 - 1191644Not Available
trigger factorSAMN02910370_01039Not AvailableNegative1193297 - 119463147640.9
Trna-leuNot AvailableNot AvailablePositive1194785 - 1194867Not Available
abc-type fe3+ transport system, substrate-binding proteinSAMN02910370_01041Not AvailablePositive1195012 - 119593834216.3
ni2+-binding gtpase involved in regulation of expression and maturation of urease and hydrogenaseSAMN02910370_01042Not AvailablePositive1195954 - 119663425237.8
abc-type lipoprotein export system, atpase componentSAMN02910370_01043Not AvailablePositive1196645 - 119764637638.6

Displaying genes 1031 – 1040 of 2876 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.