Paracoccus sp. SM22M-07

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Paracoccus

Description

Paracoccus sp. SM22M-07 is a bacterial strain characterized by the presence of flagella, which suggests a capability for motility. This trait can be significant in various ecological contexts, potentially aiding the organism in navigating its environment and accessing nutrients or escaping unfavorable conditions. The strain possesses a single replicon, indicating a simpler genomic architecture compared to organisms with multiple replicons. This single replicon structure may influence the organism's replication and gene expression dynamics, potentially impacting its adaptability and evolutionary strategies. Paracoccus sp. SM22M-07 is associated with the accession number JPKW00000000.1, which serves as a reference for genomic data related to this strain. Accessions are crucial for researchers seeking to study the genetic makeup, metabolic pathways, and ecological roles of this bacterium within its habitat. Overall, the presence of flagella and the single replicon structure of Paracoccus sp. SM22M-07 highlight its potential adaptive strategies, which may include motility for resource acquisition and a streamlined genetic framework facilitating efficient replication. This suggests that Paracoccus sp. SM22M-07 may play a dynamic role in its ecosystem, contributing to nutrient cycling and possibly interacting with other microorganisms through competitive or symbiotic relationships.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusParacoccus
SpeciesParacoccus sp. SM22M-07
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paracoccus sp. SM22M-07 scaffold60, whole genome shotgun sequence.

Gene Summary

Adenine Count

687403 bp

Thymine Count

686892 bp

Guanine Count

1263544 bp

Cytosine Count

1266630 bp

Genome Length

3905170 bp

Protein-coding Genes

3248 genes

Non-Coding Genes

87 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribokinaseIE00_06735Not AvailablePositive1287160 - 128806532471.7
galactarate dehydrataseIE00_06740Not AvailableNegative1288062 - 128953751157.9
dioxygenaseIE00_06745Not AvailableNegative1289530 - 129093650197.0
3-ketoacyl-acp reductaseIE00_06750Not AvailableNegative1290938 - 129166325450.4
5-keto-4-deoxyuronate isomeraseIE00_06755Not AvailableNegative1291660 - 129248430277.1
cupinIE00_06760Not AvailableNegative1292496 - 129277710276.1
c4-dicarboxylate abc transporter permeaseIE00_06765Not AvailableNegative1292774 - 129405445132.4
c4-dicarboxylate abc transporterIE00_06775Not AvailableNegative1294720 - 129569135521.9
glucuronate isomeraseIE00_06780Not AvailableNegative1295715 - 129712152667.3
gntr family transcriptional regulatorIE00_06785Not AvailablePositive1297202 - 129789725811.7

Displaying genes 1201 – 1210 of 3335 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.