Pseudobutyrivibrio sp. AR14

Gram-positive

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Pseudobutyrivibrio

Description

Pseudobutyrivibrio sp. AR14 is a Gram-positive bacterium characterized by the presence of flagella, which suggests motility. This motile capability may enhance its ability to navigate its environment, possibly allowing it to colonize various niches effectively. Pseudobutyrivibrio species are known to be involved in the fermentation processes within the gastrointestinal tracts of herbivores, contributing to the breakdown of complex carbohydrates. The genome of Pseudobutyrivibrio sp. AR14 consists of a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and metabolism. The accession number for its genomic data is FMUY00000000.1, which provides a reference point for researchers interested in genomic studies or comparative analyses within the genus. The ecological role of Pseudobutyrivibrio sp. AR14 likely revolves around its contribution to the microbial community in the digestive systems of ruminants. By participating in the fermentation of dietary fibers, it may aid in nutrient absorption and energy production for its host, showcasing a symbiotic relationship. This bacterium, along with others in its genus, plays a significant role in the overall health and efficiency of herbivorous digestion, illustrating the importance of microbial diversity in gut ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusPseudobutyrivibrio
SpeciesPseudobutyrivibrio sp. AR14
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudobutyrivibrio sp. AR14 genome assembly, contig:

Gene Summary

Adenine Count

926288 bp

Thymine Count

942412 bp

Guanine Count

590985 bp

Cytosine Count

592355 bp

Genome Length

3053264 bp

Protein-coding Genes

2780 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
na+/h+ antiporter nhacSAMN05660668_01821Not AvailableNegative1936983 - 193852154561.7
4-hydroxy-tetrahydrodipicolinate synthaseSAMN05660668_01822Not AvailableNegative1938508 - 193939231476.9
n-acetylmuramoyl-l-alanine amidaseSAMN05660668_01824Not AvailablePositive1939743 - 194053428778.8
voltage-gated potassium channelSAMN05660668_01825Not AvailablePositive1940556 - 194151835989.5
diguanylate cyclase (ggdef) domain-containing proteinSAMN05660668_01826Not AvailableNegative1941495 - 194302758336.3
2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase familySAMN05660668_01827Not AvailablePositive1943151 - 194481258405.8
eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant)SAMN05660668_01828Not AvailableNegative1944905 - 194680073377.0
caax protease self-immunitySAMN05660668_01829Not AvailableNegative1946924 - 194775730555.3
caax protease self-immunitySAMN05660668_01830Not AvailableNegative1947774 - 194856228757.3
caax protease self-immunitySAMN05660668_01831Not AvailableNegative1948559 - 194935629233.7

Displaying genes 1811 – 1820 of 2833 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.