Pseudobutyrivibrio sp. YE44

Gram-positive

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Pseudobutyrivibrio

Description

Pseudobutyrivibrio sp. YE44 is a Gram-positive bacterium characterized by the presence of flagella, which suggests motility capabilities. This organism has a single replicon, indicating a relatively simple genomic structure. Its genetic information can be accessed under the accession number FMXT00000000.1, allowing for further studies related to its genetic and functional properties. The genus Pseudobutyrivibrio is known for its role in the fermentation processes within the gastrointestinal tracts of ruminants. The flagella present in Pseudobutyrivibrio sp. YE44 may facilitate its movement within the complex gut environment, potentially aiding in its ability to colonize and thrive in such habitats. Given its Gram-positive nature, this bacterium may also possess certain cell wall characteristics that could contribute to its ecological interactions. In summary, Pseudobutyrivibrio sp. YE44 represents a motile, Gram-positive bacterium with a simple genomic architecture. Its motility and ecological niche suggest a potential role in fermentation processes, contributing to the overall microbial ecosystem within ruminant digestive systems. This highlights the importance of studying such microorganisms in understanding gut microbiota dynamics and their impact on host health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusPseudobutyrivibrio
SpeciesPseudobutyrivibrio sp. YE44
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudobutyrivibrio sp. YE44 genome assembly, contig:

Gene Summary

Adenine Count

993277 bp

Thymine Count

984390 bp

Guanine Count

631192 bp

Cytosine Count

632993 bp

Genome Length

3242047 bp

Protein-coding Genes

2895 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomeraseSAMN02910298_01303Not AvailableNegative1411229 - 141201729367.8
aspartyl aminopeptidaseSAMN02910298_01304Not AvailableNegative1412082 - 141338948550.0
nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) familySAMN02910298_01305Not AvailableNegative1413382 - 141400223029.6
exonucleaseSAMN02910298_01306Not AvailableNegative1414083 - 141497333436.7
zinc-ribbon domain-containing proteinSAMN02910298_01307Not AvailableNegative1415192 - 141678157944.7
cation diffusion facilitator family transporterSAMN02910298_01308Not AvailablePositive1417414 - 141878750740.7
hypothetical proteinSAMN02910298_01309Not AvailableNegative1418979 - 142058357669.0
hypothetical proteinSAMN02910298_01310Not AvailableNegative1420621 - 142213253995.0
[fefe] hydrogenase, group b1/b3SAMN02910298_01311Not AvailableNegative1422389 - 142386754079.3
[fefe] hydrogenase h-cluster maturation gtpase hydfSAMN02910298_01312Not AvailableNegative1423894 - 142509644625.7

Displaying genes 1301 – 1310 of 2957 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.