Pseudobutyrivibrio sp. YE44

Gram-positive

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Pseudobutyrivibrio

Description

Pseudobutyrivibrio sp. YE44 is a Gram-positive bacterium characterized by the presence of flagella, which suggests motility capabilities. This organism has a single replicon, indicating a relatively simple genomic structure. Its genetic information can be accessed under the accession number FMXT00000000.1, allowing for further studies related to its genetic and functional properties. The genus Pseudobutyrivibrio is known for its role in the fermentation processes within the gastrointestinal tracts of ruminants. The flagella present in Pseudobutyrivibrio sp. YE44 may facilitate its movement within the complex gut environment, potentially aiding in its ability to colonize and thrive in such habitats. Given its Gram-positive nature, this bacterium may also possess certain cell wall characteristics that could contribute to its ecological interactions. In summary, Pseudobutyrivibrio sp. YE44 represents a motile, Gram-positive bacterium with a simple genomic architecture. Its motility and ecological niche suggest a potential role in fermentation processes, contributing to the overall microbial ecosystem within ruminant digestive systems. This highlights the importance of studying such microorganisms in understanding gut microbiota dynamics and their impact on host health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusPseudobutyrivibrio
SpeciesPseudobutyrivibrio sp. YE44
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudobutyrivibrio sp. YE44 genome assembly, contig:

Gene Summary

Adenine Count

993277 bp

Thymine Count

984390 bp

Guanine Count

631192 bp

Cytosine Count

632993 bp

Genome Length

3242047 bp

Protein-coding Genes

2895 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolaseSAMN02910298_01233Not AvailableNegative1325771 - 132641222860.8
arac-type dna-binding proteinSAMN02910298_01234Not AvailablePositive1327156 - 132803134150.8
hypothetical proteinSAMN02910298_01235Not AvailableNegative1328176 - 132921939100.6
dna-binding transcriptional regulator, arsr familySAMN02910298_01236Not AvailableNegative1329370 - 133035338177.5
abc-2 type transport system permease proteinSAMN02910298_01237Not AvailableNegative1330365 - 133117430614.2
abc-2 type transport system atp-binding proteinSAMN02910298_01238Not AvailableNegative1331171 - 133216637552.8
abc-2 type transport system permease proteinSAMN02910298_01239Not AvailableNegative1332175 - 133298130145.8
pap2 superfamily proteinSAMN02910298_01240Not AvailableNegative1333155 - 133399732227.0
l,d-peptidoglycan transpeptidase ykud, erfk/ybis/ycfs/ynhg familySAMN02910298_01241Not AvailableNegative1334131 - 133489227365.8
hypothetical proteinSAMN02910298_01242Not AvailableNegative1334986 - 13352078263.82

Displaying genes 1231 – 1240 of 2957 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.