Shewanella mangrovi str. YQH10

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella mangrovi strain YQH10 is a notable bacterium characterized by the presence of flagella, which suggests a capability for motility. This trait may facilitate its movement through various aquatic environments, potentially enhancing its interactions with surrounding microorganisms and its ability to access nutrients. This strain has a single replicon, indicating a streamlined genomic structure that may reflect its adaptation to specific ecological niches. The genomic data for Shewanella mangrovi strain YQH10 is cataloged under the accession number JPEO00000000.1, which provides a reference for researchers interested in studying its genetic makeup and functional capabilities. Ecologically, members of the Shewanella genus are known for their versatility in electron transfer processes and their role in biogeochemical cycles, particularly in reducing metals and organic compounds. The motile nature of Shewanella mangrovi strain YQH10, combined with its genomic characteristics, likely positions it as an important player in the microbial community dynamics of mangrove ecosystems. These environments are typically rich in organic matter and nutrients, where bacteria like Shewanella can contribute to the breakdown of organic materials, influencing nutrient cycling and the overall health of the ecosystem. Understanding the traits of Shewanella mangrovi strain YQH10 can provide insights into the ecological functions of mangrove-associated microorganisms.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella mangrovi
StrainYQH10

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella mangrovi strain YQH10 contig62, whole genome shotgun

Gene Summary

Adenine Count

1091258 bp

Thymine Count

1095325 bp

Guanine Count

1006299 bp

Cytosine Count

1022912 bp

Genome Length

4215794 bp

Protein-coding Genes

3384 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
integration host factor subunit betaHR45_02805Not AvailableNegative659225 - 65951210636.8
30s ribosomal protein s1HR45_02810Not AvailableNegative659595 - 66126261170.2
cytidylate kinaseHR45_02815Not AvailableNegative661364 - 66205925270.0
3-phosphoshikimate 1-carboxyvinyltransferaseHR45_02820Not AvailableNegative662206 - 66348945689.0
aromatic amino acid aminotransferaseHR45_02825Not AvailablePositive663872 - 66506243287.9
3-phosphoserine/phosphohydroxythreonine aminotransferaseHR45_02830Not AvailableNegative665153 - 66624439697.9
dna gyrase subunit aHR45_02835Not AvailableNegative666323 - 66901699453.9
3-demethylubiquinone-9 3-methyltransferaseHR45_02840Not AvailablePositive669340 - 67005026413.9
hypothetical proteinHR45_02845Not AvailablePositive670056 - 67072123915.8
ribonucleotide-diphosphate reductase subunit alphaHR45_02850Not AvailablePositive671136 - 67342485490.9

Displaying genes 511 – 520 of 3474 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.