Shewanella mangrovi str. YQH10

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella mangrovi strain YQH10 is a notable bacterium characterized by the presence of flagella, which suggests a capability for motility. This trait may facilitate its movement through various aquatic environments, potentially enhancing its interactions with surrounding microorganisms and its ability to access nutrients. This strain has a single replicon, indicating a streamlined genomic structure that may reflect its adaptation to specific ecological niches. The genomic data for Shewanella mangrovi strain YQH10 is cataloged under the accession number JPEO00000000.1, which provides a reference for researchers interested in studying its genetic makeup and functional capabilities. Ecologically, members of the Shewanella genus are known for their versatility in electron transfer processes and their role in biogeochemical cycles, particularly in reducing metals and organic compounds. The motile nature of Shewanella mangrovi strain YQH10, combined with its genomic characteristics, likely positions it as an important player in the microbial community dynamics of mangrove ecosystems. These environments are typically rich in organic matter and nutrients, where bacteria like Shewanella can contribute to the breakdown of organic materials, influencing nutrient cycling and the overall health of the ecosystem. Understanding the traits of Shewanella mangrovi strain YQH10 can provide insights into the ecological functions of mangrove-associated microorganisms.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella mangrovi
StrainYQH10

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella mangrovi strain YQH10 contig62, whole genome shotgun

Gene Summary

Adenine Count

1091258 bp

Thymine Count

1095325 bp

Guanine Count

1006299 bp

Cytosine Count

1022912 bp

Genome Length

4215794 bp

Protein-coding Genes

3384 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphatidate cytidylyltransferaseHR45_12200Not AvailableNegative2721632 - 272248931409.4
udp pyrophosphate synthaseHR45_12205Not AvailableNegative2722501 - 272333431289.4
ribosome recycling factorHR45_12210Not AvailableNegative2723417 - 272397420807.1
uridylate kinaseHR45_12215Not AvailableNegative2724001 - 272473226258.2
elongation factor tsHR45_12220Not AvailableNegative2724802 - 272565330472.6
30s ribosomal protein s2HR45_12225Not AvailableNegative2725777 - 272650226476.9
methionine aminopeptidaseHR45_12230Not AvailablePositive2726860 - 272766029431.3
protein-pii uridylyltransferaseHR45_12235Not AvailablePositive2727683 - 273025398296.0
2,3,4,5-tetrahydropyridine-2,6-carboxylate n-succinyltransferaseHR45_12240Not AvailablePositive2730273 - 273109729728.8
recombination and repair proteinHR45_12245Not AvailableNegative2731178 - 273283960570.8

Displaying genes 2191 – 2200 of 3474 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.