Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis fribergensis |
| Strain | Kp5.2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Kuwaiti soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
903198 bp
Thymine Count
901834 bp
Guanine Count
1585793 bp
Cytosine Count
1602759 bp
Genome Length
4993584 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gsph/fimt family pseudopilin | SKP52_RS04175 | Not Available | Positive | 890782 - 891264 | 17152.7 |
| type ii secretion system minor pseudopilin gspi | SKP52_RS04180 | Not Available | Positive | 891254 - 891640 | 13488.2 |
| type ii secretion system minor pseudopilin gspj | SKP52_RS04185 | Not Available | Positive | 891637 - 892248 | 21642.9 |
| type ii secretion system minor pseudopilin gspk | SKP52_RS04190 | Not Available | Positive | 892245 - 893252 | 35313.6 |
| type ii secretion system protein gspl | SKP52_RS04195 | Not Available | Positive | 893254 - 894399 | 39873.8 |
| type ii secretion system protein gspm | SKP52_RS04200 | Not Available | Positive | 894396 - 894878 | 17015.5 |
| type ii secretion system protein n | SKP52_RS04205 | Not Available | Positive | 894875 - 895591 | 24119.3 |
| prepilin peptidase | SKP52_RS04210 | Not Available | Positive | 895593 - 896360 | 27298.3 |
| peptidoglycan-associated lipoprotein pal | SKP52_RS04215 | Not Available | Negative | 896347 - 896865 | 18292.4 |
| tol-pal system beta propeller repeat protein tolb | SKP52_RS04220 | Not Available | Negative | 896966 - 898330 | 48888.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
