Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis fribergensis |
| Strain | Kp5.2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Kuwaiti soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
903198 bp
Thymine Count
901834 bp
Guanine Count
1585793 bp
Cytosine Count
1602759 bp
Genome Length
4993584 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | SKP52_RS04130 | Not Available | Negative | 878438 - 878872 | 14956.9 |
| hypothetical protein | SKP52_RS26725 | Not Available | Positive | 879229 - 879387 | 5369.35 |
| Trna-leu | Not Available | Not Available | Positive | 879513 - 879599 | Not Available |
| hypothetical protein | SKP52_RS04140 | Not Available | Positive | 879909 - 881486 | 53692.3 |
| tonb-dependent receptor domain-containing protein | SKP52_RS04145 | Not Available | Positive | 881571 - 884264 | 98569.1 |
| type ii secretion system protein n | SKP52_RS04150 | Not Available | Positive | 884535 - 885416 | 29742.9 |
| type ii secretion system secretin gspd | SKP52_RS04155 | Not Available | Positive | 885423 - 887627 | 77174.8 |
| type ii secretion system atpase gspe | SKP52_RS04160 | Not Available | Positive | 887624 - 889117 | 53223.1 |
| type ii secretion system inner membrane protein gspf | SKP52_RS04165 | Not Available | Positive | 889110 - 890324 | 43695.0 |
| type ii secretion system major pseudopilin gspg | SKP52_RS04170 | Not Available | Positive | 890328 - 890807 | 17350.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
