Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis fribergensis |
| Strain | Kp5.2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Kuwaiti soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
903198 bp
Thymine Count
901834 bp
Guanine Count
1585793 bp
Cytosine Count
1602759 bp
Genome Length
4993584 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | SKP52_RS23945 | Not Available | Positive | 114292 - 116886 | 91711.3 |
| atxe2 family lasso peptide isopeptidase | SKP52_RS23950 | Not Available | Positive | 116921 - 119002 | 78097.8 |
| asparagine synthetase b family protein | SKP52_RS23955 | Not Available | Negative | 119010 - 120755 | 63189.1 |
| lasso peptide biosynthesis b2 protein | SKP52_RS23960 | Not Available | Negative | 120755 - 121408 | 24349.6 |
| benenodin family lasso peptide | SKP52_RS26360 | Not Available | Negative | 121465 - 121593 | 4380.99 |
| gntr family transcriptional regulator | SKP52_RS23965 | Not Available | Negative | 121763 - 122413 | 23312.1 |
| sigma factor-like helix-turn-helix dna-binding protein | SKP52_RS23970 | Not Available | Negative | 122628 - 123143 | 19474.4 |
| duf1810 domain-containing protein | SKP52_RS23975 | Not Available | Positive | 123357 - 123782 | 16037.3 |
| hypothetical protein | SKP52_RS23980 | Not Available | Positive | 123944 - 124900 | 35034.3 |
| hypothetical protein | SKP52_RS23985 | Not Available | Positive | 124900 - 125397 | 17690.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
