Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis fribergensis |
| Strain | Kp5.2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Kuwaiti soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
903198 bp
Thymine Count
901834 bp
Guanine Count
1585793 bp
Cytosine Count
1602759 bp
Genome Length
4993584 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate epimerase | SKP52_RS17995 | Not Available | Positive | 3861848 - 3862654 | 28446.9 |
| miab/rimo family radical sam methylthiotransferase | SKP52_RS18000 | Not Available | Positive | 3862651 - 3863958 | 46148.9 |
| signal recognition particle-docking protein ftsy | SKP52_RS18005 | Not Available | Positive | 3863955 - 3864881 | 32812.6 |
| inner membrane-spanning protein ycib | SKP52_RS18010 | Not Available | Positive | 3864878 - 3865549 | 24509.5 |
| urate hydroxylase puud | SKP52_RS18015 | Not Available | Positive | 3865630 - 3866202 | 20784.1 |
| gamma carbonic anhydrase family protein | SKP52_RS18020 | Not Available | Negative | 3866284 - 3866838 | 19565.8 |
| spermidine synthase | SKP52_RS18025 | Not Available | Negative | 3866835 - 3869126 | 82358.0 |
| porphobilinogen synthase | SKP52_RS18030 | Not Available | Negative | 3869092 - 3870090 | 35512.1 |
| m23 family metallopeptidase | SKP52_RS18035 | Not Available | Negative | 3870263 - 3871807 | 54755.0 |
| helicase-related protein | SKP52_RS18040 | Not Available | Positive | 3872082 - 3874862 | 100254.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
