Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis fribergensis |
| Strain | Kp5.2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Kuwaiti soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
903198 bp
Thymine Count
901834 bp
Guanine Count
1585793 bp
Cytosine Count
1602759 bp
Genome Length
4993584 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formyltetrahydrofolate deformylase | SKP52_RS16215 | Not Available | Negative | 3493078 - 3493971 | 32646.9 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | SKP52_RS16220 | Not Available | Negative | 3494089 - 3495201 | 39400.5 |
| l-serine ammonia-lyase | SKP52_RS16225 | Not Available | Negative | 3495727 - 3497106 | 48377.9 |
| superoxide dismutase | SKP52_RS16230 | Not Available | Negative | 3497276 - 3497890 | 22557.3 |
| cisplatin damage response atp-dependent dna ligase | SKP52_RS16235 | Not Available | Negative | 3498076 - 3499644 | 57949.0 |
| ligase-associated dna damage response exonuclease | SKP52_RS16240 | Not Available | Negative | 3499641 - 3500654 | 37388.6 |
| udgx family uracil-dna binding protein | SKP52_RS16245 | Not Available | Negative | 3500654 - 3502069 | 52935.2 |
| putative dna modification/repair radical sam protein | SKP52_RS16250 | Not Available | Negative | 3502078 - 3503328 | 45763.5 |
| sensor histidine kinase | SKP52_RS16255 | Not Available | Negative | 3503403 - 3504920 | 56513.8 |
| response regulator | SKP52_RS16260 | Not Available | Positive | 3505129 - 3505923 | 28623.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
